Gene Sama_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3134 
Symbol 
ID4605381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3722702 
End bp3723202 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID639782550 
Producthypothetical protein 
Protein accessionYP_929006 
Protein GI119776266 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC AACTGGAACG TTTGCTGTGG AGCAGCCGTC TGTCGGTGAT TTTTGGGGTG 
GTGGCCTGTA TTGTGGCGGC CCTGGTGGTT TTTATCATGG GCGCCAAGGA CATGCTGCAC
ATGTTCCACC TGCTGTGGGA TTACCTTGCC AGCGGCAGCC TTGAGGTGCG TAACGACCTG
GTGATGGTGG TCATTGAGAT TTTGGATACC TTCTTGTTGG GCGCCGTACT GCTGATTTTT
GCTTTTGGTC TTTACGAGCT CTTTATCCGT GACATCAAAC CGGCATCCGA ATCGCAGGTG
GGCGGTAAAA TATTGATTAT CAGCAGCATA GACTCGCTCA AGAGCAAGCT TGGCAAGGTC
ATCCTCATGA TGCTGGTTAT CAAGCTGTTT TCTTTTTTCA GCGAGCTTAA GCCACAGAGT
GCGCTGGAGC TGCTGTATAT GGCCGGCGTG GTGGTGTTGG TTGCCCTCGC GCTTATGCTC
ACCAAGGACA AGCAGGCCTG A
 
Protein sequence
MKNQLERLLW SSRLSVIFGV VACIVAALVV FIMGAKDMLH MFHLLWDYLA SGSLEVRNDL 
VMVVIEILDT FLLGAVLLIF AFGLYELFIR DIKPASESQV GGKILIISSI DSLKSKLGKV
ILMMLVIKLF SFFSELKPQS ALELLYMAGV VVLVALALML TKDKQA