Gene Sama_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3107 
Symbol 
ID4605354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3679164 
End bp3679691 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID639782523 
Productputative phosphohistidine phosphatase, SixA 
Protein accessionYP_928979 
Protein GI119776239 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0257357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGGGG GGTTAGTGTT GAAAAATAAA ATGGCAGTCA TAGTTGCCGG TCTGGGTCTG 
CTTTTGAGCG TGCTCGCCAG CCCCGGCTGG GCCGCCGATA TCTGGTTGTT TCGCCACGGT
GAAAAGGCGC CGGGAAAGGA TCCTGCGCTG ACCGAAGCGG GGCAGGCCCG GGCACAGCGT
ATTGCCGGGC TTATTCTCAG GGCGCCATCG ACCGGCGATA ACATCCTCCT CTATTCCACC
GATTATCGCC GCACCCAGGA AACCATAGCA CCGCTGGCCG AGGCGACAGG GGTGAAGGTG
CAGAGTTACG ACCCTGCCGA CATGGCACAG TTGGCAGCCA AGATCAGGGT GCTCGATGGC
ACAGTCGTCG TGGCCGGTCA CAGCAACACC ACGCCAGAAC TACTCAAACA CCTGACCGGC
ATTGAACGCG ACATTCCCGA AGACAGATTT GATGTGCTCT ATCATCTTGT GCCTGCTGCA
CAAGGCTTTA TCCTGCAGGA GCTGTCATCG GATACGTCTG AGCACTGA
 
Protein sequence
MGGGLVLKNK MAVIVAGLGL LLSVLASPGW AADIWLFRHG EKAPGKDPAL TEAGQARAQR 
IAGLILRAPS TGDNILLYST DYRRTQETIA PLAEATGVKV QSYDPADMAQ LAAKIRVLDG
TVVVAGHSNT TPELLKHLTG IERDIPEDRF DVLYHLVPAA QGFILQELSS DTSEH