| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3103 |
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| Symbol | |
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| ID | 4605350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3677222 |
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| End bp | 3677782 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639782519 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_928975 |
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| Protein GI | 119776235 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0104717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCG GCAAATTAAT CAGATGGAAC GATGAACGAG GTTTTGGTTT TATCAAACCA
GAGCAGGACG GCGCTGACGA TGTGTTTATT CACATCTCGT CACTGAAACA GATGAGTCGG
GCGCCACGTA TTGGCGACAT CATAGTGTTT CAATTGCAAA CCTCATCAGA CGGCAAACAG
CAAGCCGGTC TTGCCCGTAT CGAAGGGGTG GCTATCAAAC CCGGCTCACC AATCAAAGCC
CGCAAAACCT CAACGACATT TCCATTGGGT AAACTGCTGA AGGGCATGGT ACTGATAGCC
TTGATAGCCT TTGCGGTGCC TAAATTAGCC CCGCTGGTGG AAGGCTTTAT CTCTAAGGAT
ACCCGCTATT CAGTGCCACC CATGGAGAGC GAGACCATAG TGCCATACCC AGAACCAGTA
TTTCGCTGCG AAGGTAAAAC CTATTGCAGT GAAATGCGCT CCTGTGCCGA AGCCACCTTC
TATCAAAACA ATTGTCCGGG CACGAAAATG GACGGTGACA ACGACGGCAT CCCCTGTGAA
TCCCAATGGT GTGGTCACTG A
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| Protein sequence | MQRGKLIRWN DERGFGFIKP EQDGADDVFI HISSLKQMSR APRIGDIIVF QLQTSSDGKQ
QAGLARIEGV AIKPGSPIKA RKTSTTFPLG KLLKGMVLIA LIAFAVPKLA PLVEGFISKD
TRYSVPPMES ETIVPYPEPV FRCEGKTYCS EMRSCAEATF YQNNCPGTKM DGDNDGIPCE
SQWCGH
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