Gene Sama_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3056 
Symbol 
ID4605303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3632112 
End bp3632576 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content48% 
IMG OID639782472 
Productputative chemotaxis protein CheX 
Protein accessionYP_928928 
Protein GI119776188 
COG category[N] Cell motility 
COG ID[COG1406] Predicted inhibitor of MCP methylation, homolog of CheC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.23032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.617715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCG AATTTATCAA TCCGTTTCTA CAATCTCTGC TCAATGTTGT CTCAACTATG 
GCGTCGATGC AGCTCACTCC GGGTAAGCCC CGGCTGAAAA CCGATAATCT TGCCAAGGGG
GATGTATCAG GGCTGATTGG CATGGTAGGC CCTCAGACCA AGGGCTCTAT GTCCATCACG
TTTGAGCAAA GTCTGGCGCT GCAGATAATG CAAAATATGC TGGGCGAAAA TCCGGGGACC
ATCAATGATG AGGTCACAGA TATGGTGGGT GAAATCACCA ATATGGTCAC AGGCGGCGCC
AAAAATCTCT TGAGTGACAA AGGATACGAT TTTGAAATGG CAACCCCTGT GGTGGTCGCT
GGTACGGGTC ATAGAATTTC CCACAAGGCC GATGGCACCA AAATTATCAT GCCATTCACC
AGCCCCTATG GCACTGCGTA CATTGAGATT TGTTTTGAAA ATTAG
 
Protein sequence
MNVEFINPFL QSLLNVVSTM ASMQLTPGKP RLKTDNLAKG DVSGLIGMVG PQTKGSMSIT 
FEQSLALQIM QNMLGENPGT INDEVTDMVG EITNMVTGGA KNLLSDKGYD FEMATPVVVA
GTGHRISHKA DGTKIIMPFT SPYGTAYIEI CFEN