Gene Sama_3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3051 
Symbol 
ID4605298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3628805 
End bp3629284 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content51% 
IMG OID639782467 
Producthypothetical protein 
Protein accessionYP_928923 
Protein GI119776183 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.259622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.692441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGTA TGACATTGAA ATCGATATTC AAACACATGT TTAATTTAGG CCTGATTGGC 
CTGCTGTCCA TGCCCGCCAT GGCTGAGATT ATAGTAAAAG ATGGTTTTGT GCGTGCCATG
CCGCCATCTG CCCCTAATAC CGCAGCCTAT TTCACCCTCG AAAATCACGG TCCGGCCACC
GAGTTGGTTG CCGTTGAGAG CAGCATCGCC AAAGAAGCGC AGCTGCACAC CCTGCTGACC
GAAAATGACA TAGTTAAAAT GCGCCAGGTT GAAGGGTTTG ACCTGCCATC GCACGGTACC
TTGAAACTGG GTGAACAGGG TGACCATGTC ATGCTGCTTG GCCTTGCATC ACCGCTGGCC
GAAGGCAACA TGGTGACACT GCTGCTTACA TTCAAAGATG GCCAGACGCT TGAGATACAA
CTGCCAGTCG CCAAGGCTGG CAATGCACAG GCCGATGAAC ATCATCACCA TCATCATTAA
 
Protein sequence
MECMTLKSIF KHMFNLGLIG LLSMPAMAEI IVKDGFVRAM PPSAPNTAAY FTLENHGPAT 
ELVAVESSIA KEAQLHTLLT ENDIVKMRQV EGFDLPSHGT LKLGEQGDHV MLLGLASPLA
EGNMVTLLLT FKDGQTLEIQ LPVAKAGNAQ ADEHHHHHH