Gene Sama_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2992 
SymbolmltA 
ID4605239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3565041 
End bp3566153 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID639782403 
Productmurein transglycosylase A 
Protein accessionYP_928864 
Protein GI119776124 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2821] Membrane-bound lytic murein transglycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCAG CCCCGTTTAA ATCTCTGAGT TGTGTCGTGT TGGCTGCCGT TATCAGTGCC 
TGTGCAAGTC AGCCAGACAG GGAGCTTGGC AAGCGTTATC TGGATGGTGA ACTCCAGCAG
CCGCTCAATT GGGTTGCAGC GGTGCAATCC GATGCCAATC GCAACTACAC CCGCTTTGCC
GACCAAAGCA GTTTGGTGCT TGAGCGTTCA CCGCGTCTGG CCTCCCGTTA CGCGCCCCTC
TACCGGCAGC TGTCTCAGTG GCTTGAGAGT GGTGGCGATC CGCTTTCACT GGGGAATTTT
GGGATTGAAG CGGCCCAGTT TGGTGGCGCC GATCGCCAGG GGCATGTGCT CTTTACCGGC
TACTTTTCTC CAGTGCTGGA GGTGCGCCAT AGCCCCGACA GCCGCTTTCA ATACCCGCTT
TATGGTGTGC CCGACTGTGT GAAACACAAC TCGCCATGCC CAAGCCGCGA GGCCATTTTA
CAGGGAGCAC TGTCGGGGCA GGGGTTGGAG CTGGCCTACA GCGACAGCCT TATCGACAGT
TTTCTGATGG AAGTGCAGGG CTCAGGCTTT GTCCATTATG GAGATAACGA CGAGCTGCAA
TACCTGGGCT ATGGCGGTAA AAATGGCCAT GCGTACCGGA GCATAGGTAA AGTTTTGATT
GAACAGGGTG AAGTGGCAAA AGAGCAAATG TCGCTGCGGG CCATTAAAGC CTGGGCCGAC
AGCCATTCTG AAGACGAAGT GAAGCAACTG CTCGCCCACA ATGCATCCTT TGTGTTTTTC
CAGGCACGGC CCAACCATGA TGTCTTGGGC AGTGCAGGTA TTCCCTTGTT ACCCATGGCG
GCCGTGGCGG CCGATAAACA GCTGCTGCCC ATGGGCACGC CGCTGCTGGC CGAGGTGCCT
TTGCTCGATG ACGTAGGCAA CTGGACCGGC AGGCATGAAC TCCGGTTGCT GATTGCGCTG
GATACCGGGG GCGCTGTGGA TGGCGGCCAC CTGGACCTTT ACCACGGCAT GGGGCCCGAG
GCCGGAATGG CAGCAGGGCA CTACAAACAC TTTGGCCGTG TATGGCGGCT GGGACTGGGC
GCAGGCTCCA GTGTCACCCC GGGGACGCCC TGA
 
Protein sequence
MKSAPFKSLS CVVLAAVISA CASQPDRELG KRYLDGELQQ PLNWVAAVQS DANRNYTRFA 
DQSSLVLERS PRLASRYAPL YRQLSQWLES GGDPLSLGNF GIEAAQFGGA DRQGHVLFTG
YFSPVLEVRH SPDSRFQYPL YGVPDCVKHN SPCPSREAIL QGALSGQGLE LAYSDSLIDS
FLMEVQGSGF VHYGDNDELQ YLGYGGKNGH AYRSIGKVLI EQGEVAKEQM SLRAIKAWAD
SHSEDEVKQL LAHNASFVFF QARPNHDVLG SAGIPLLPMA AVAADKQLLP MGTPLLAEVP
LLDDVGNWTG RHELRLLIAL DTGGAVDGGH LDLYHGMGPE AGMAAGHYKH FGRVWRLGLG
AGSSVTPGTP