| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2939 |
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| Symbol | |
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| ID | 4605186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3493528 |
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| End bp | 3494715 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782350 |
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| Product | tyrosine-specific transport protein, putative |
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| Protein accession | YP_928811 |
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| Protein GI | 119776071 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.121322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0322125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTTGA AAACACTTGG CTCTATCGCC ATTGTGGCGG GTACCGCCAT TGGGGCCGGC
ATGTTGGCGT TGCCGCTGGC GACCGCCGCC CTTGGGGTGA TCCCCGCGCT GTTATTGCTG
CTGGTCGTGT GGGCCATTTC GGCATATACC TCCCTCCTTA TGCTCGAAAT TAACCTGCGC
AGTGGCGTGG GTGACAATGT GCACGCCATC ACCGGCAAGA CACTGGGCAA AAAGGGGCAG
CTTATCCAGG GCGCCTCTTT CCTGAGTTTA CTGTATGCCC TGACGGCTGC CTATCTGACC
GGCGGCTCCT CCTTGCTGGT ACACCGCATG GAGTCGGTAT TTTCCATCAA TCTCGATGGT
CAGCTGGCGG TACTGCTTTT TACGCTGGTG CTTGGCAGCG TGGCCGCATT GGGTGTGAGC
TGGGTGGATA AGCTCTCCCG CTTGCTGTTC AGCTTGATGG TGGTGCTCCT GGTGCTGGTG
GTGGGCTTCC TGTTGCCTGA AATCCGCCCC TCTGTGATTG CCGCCGATGC CTTCGAAAAA
GTGTCGGCCA ATGCCTGGAT GGCTGCTATT CCCGTCGTAT TTACGTCTTT TGGTTTCCAT
GTGTGTATTG CCACATTGGT GCGCTACCTC GACGGTGATG CGGTTAACCT GCGCAAGGTG
CTGCTGATTG GCTCGACCAT CCCACTGGTG TGTTACATCC TGTGGCTGCT GGTGACCCTG
GGAACCGTGG GTGGAGATGA AATTGCCACC TTCAACGGCG CCCTGCCCAA GCTTATCAGC
GCCCTTCAGG AGCTGGCGGC ACACCCCGTA GTGGGTCAGA GCATTGCGGT GTTTGCCGAT
CTGGCGCTGG TGACCTCCTT CCTTGGAGTA ACCATGAGCC TGTTTGATTT TCTGGCCGAA
ATGACCCGCT CAAAAGGCGG TATCGGTGGC CGTTTGCAGA CCTGGATTAT CACCTTTTTA
CCACCACTGC TGTGTGCGCT CTTTGTGCCC GAAGGCTTTG TGGCCGTGCT GGGTTTTGCC
GCCATTCCGC TGGTGTTTAT GATCATTTTC CTGCCGATTG CCATGGCACT GAATCAGCGT
GCACAGTACC GGGACGGTTA TCAGGTCAGC GGCGGCAAGC TGGCCTTGTC GCTGATTGGT
GTCGCAGGGG TGGCGATTAT TGCCGCCCAG CTGTGGGTGG CACTGTAA
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| Protein sequence | MNLKTLGSIA IVAGTAIGAG MLALPLATAA LGVIPALLLL LVVWAISAYT SLLMLEINLR
SGVGDNVHAI TGKTLGKKGQ LIQGASFLSL LYALTAAYLT GGSSLLVHRM ESVFSINLDG
QLAVLLFTLV LGSVAALGVS WVDKLSRLLF SLMVVLLVLV VGFLLPEIRP SVIAADAFEK
VSANAWMAAI PVVFTSFGFH VCIATLVRYL DGDAVNLRKV LLIGSTIPLV CYILWLLVTL
GTVGGDEIAT FNGALPKLIS ALQELAAHPV VGQSIAVFAD LALVTSFLGV TMSLFDFLAE
MTRSKGGIGG RLQTWIITFL PPLLCALFVP EGFVAVLGFA AIPLVFMIIF LPIAMALNQR
AQYRDGYQVS GGKLALSLIG VAGVAIIAAQ LWVAL
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