| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2937 |
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| Symbol | |
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| ID | 4605184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3489985 |
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| End bp | 3490749 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782348 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_928809 |
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| Protein GI | 119776069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0746934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTGACT GCGCCATATC CAAAGGCACT CGCCTGTGTA AATACCTTGC CGAGGCGGGC
GTGGCCTCAC GGCGCGGTGC ATCACGCCTG ATAGAAACGG GCAGAGTCTG CATCGATGGG
CAACAAGCCT CACACAGCGA CAGAGTATTT GACTCAAACC GGGTGACTGT GGATGGCGCG
CCCCTGTGTC CAGCTCAGGC AAAAGCGTAC TTCCTTTACC ACAAACCCGT TGGCATCGAC
TGCCGCCTGC GCGCAGAGGA TCCCCACAGC CTAATCCATT GTTTGCCCGG TGATTTGCGG
CTATTCCCCG CAGGCCGACT GGACAAAGAC TCCCGCGGTC TCTTGCTGCT GACCAATGAT
GGCGAGCTGA CACAGCGCCT GATGCACCCG GACTTTCACC ATCAAAAAGG TTATCTCATT
ACCCTGAATA AAGCGCCCCA GCCCGATGAC ATTGCGGCGA TTGCGGCGGG TTTTGACTAC
GGAGAAGGCC CTACCCGCCC CTGCGTAGTG GAAGCGGCTA TCGACTGCGG CTATGCGACA
GAAGACGGCA ACCCTCGAAA GCTAAGGATG AGGCTGACAG AGGGCAAGAA GCGCCAGATC
CGTCGTCTGT GGCGGGCACG GGGCTACCGG GTGCTGGACT TACTGAGAGA GTCGATTCAA
CAACTTAACA TTGGCAAACT TGAACAAGGG GAAATCAGGA GTTTAACGGC CTCTGAACTT
CGCCAGCTTA AACGTACACT GGACTTGCCC AATGAACAGG ATTAA
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| Protein sequence | MSDCAISKGT RLCKYLAEAG VASRRGASRL IETGRVCIDG QQASHSDRVF DSNRVTVDGA
PLCPAQAKAY FLYHKPVGID CRLRAEDPHS LIHCLPGDLR LFPAGRLDKD SRGLLLLTND
GELTQRLMHP DFHHQKGYLI TLNKAPQPDD IAAIAAGFDY GEGPTRPCVV EAAIDCGYAT
EDGNPRKLRM RLTEGKKRQI RRLWRARGYR VLDLLRESIQ QLNIGKLEQG EIRSLTASEL
RQLKRTLDLP NEQD
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