| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2933 |
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| Symbol | |
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| ID | 4605180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3485997 |
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| End bp | 3486647 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782344 |
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| Product | heat shock protein DnaJ-like protein |
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| Protein accession | YP_928805 |
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| Protein GI | 119776065 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.548763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0786715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGC CACCGCTGGT TCCGTTAATC GATAACAAAA CAACCGAAGT ATCAGCCCAC
AAAGGCGACA ACCCCCTCAT CTGGCCCCTG CTGAGTTTGC TGCAAAAGTC TGTGCAGGGA
TGGAAAGTCC ACCACCTCGC CAGCGAACTT CAATCCCAGG GATTAATGCA CAACCTGGAC
CCTGCCCCGG AAAAAGATCT CTTTAAACGC AATTTTCTAC TGATGAATGC CCTGTTTGAG
CTGCAGGACA TGCTGCTGCC CAATCAGTGG GTACAAACCC AGGCCATGGA TATTCGTATC
CTGCGTCTCA TCCCAAGCGA CATCGACCTT ATCCAGCATC AGGAGGCGGG ACTGAAGAGC
TATTACCTCG ACTGGGGAAA TTACGACACC AGCACCAACG TGGTGCGCGA GATGCTTGAA
TCTTTCTGGA CCAGCTACAA GGACTACATA GGCATCAATG GCCGGGTGAT GCATCTGACC
CAGGCACTGA GGGTATTCGA ACTCGATGCC AGTGCCAGTG ACAGAGACAT TCGCCGCCAA
TGGCGCAAAC TGGCGCTGAA ATGGCACCCT GACAGACAGG GGGGCGACGC TGCGCGATTT
CGGGAAGTGT GCGAAGCCTG GCAGGCGCTC AGGGTGCGGG AGTCGGCCTA G
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| Protein sequence | MLLPPLVPLI DNKTTEVSAH KGDNPLIWPL LSLLQKSVQG WKVHHLASEL QSQGLMHNLD
PAPEKDLFKR NFLLMNALFE LQDMLLPNQW VQTQAMDIRI LRLIPSDIDL IQHQEAGLKS
YYLDWGNYDT STNVVREMLE SFWTSYKDYI GINGRVMHLT QALRVFELDA SASDRDIRRQ
WRKLALKWHP DRQGGDAARF REVCEAWQAL RVRESA
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