| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2913 |
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| Symbol | |
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| ID | 4605160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3462367 |
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| End bp | 3463845 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782324 |
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| Product | membrane protein |
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| Protein accession | YP_928785 |
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| Protein GI | 119776045 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.472096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCTA CTGCCGAGAA CTGGCAAAGC CTGTCGCCCT GGTCTGTAGT CAGCTTTACC
CTGGGCACGG CGCGCCAGGT ACTGACCCAG GGCTATGCCC TTATCCCCAT CGTCTTTACC
GGCTGGAAAC AGGGGTTCGA CTCACCGCTG GTCATTTCCG TGGCCTTATT GGTGCTGCTG
GGCATTCTCA CCTTCGCCCT GGTGCAATAT GCCACCTACA GGTTCCGCCC CGGCAGCCAT
AAACTGGAAG TGCGCCGGGG GCTGTTTTTC AAACGCAAAG ATGAATTGCC GCTGGATAAA
ATTCAGAACG TGCGACTCGA CCAACCCTTT TACTTTAAAC CTCTCTTACT CTGCACCCTG
GTAGTCGAGA CCGCAGGCTC CCGTAAAGAT GAGGTGCAAA TTGCCGCCAT GCCCCTGAGC
AATGCCATGG CCCTCAAGTC GCATTTGCTG CAAAAGCCTG CCGAACCTGT TAACCATCAC
GAGGAACAAA CGGACTCACT GCTGCTTGAA AGAGGCGGCA AGCCACTGTT TTTATTTGGG
CTTTACCACA ACAACTTTGT CTGGTTTATG GTCTTCGCCG GCTCTATCAT GGGGCAGCTG
CCGGTGGAGA GCTGGTTCGA ATCCCTTGGC CTTAACACCT TTGTGCGTAT CGAATCCCAG
GGGCCGCTGT GGGGCACCTT AAGTGTGATA GCACTGATTT TGCTGGGATA TATCTGTTTT
GCGCTCATTT CAGTGCTGTT TGCCTTTTTG AAATACTACC CCTACCGACT AAAGCTTGGC
GCCGAGTCCA CCCTGGAGCG CACGGGCGGC ATATTGGCCC ACCAGCAGGA TGCGCTGGCG
ATGAAACGCA TTCAACTGGT GGAATTCAAT CAACCCCCCA TTGCACGGCT GCTGAAGCGC
TGGACGGTGT TTTTCCGTCA GGTTCAGGGC CATGAGGTTG AACAACACCT CAAGCTGCCA
CTGCTTATCC CCTCTGTGAC TCCCGATGAG CTCCCGCCCC TGTTTGCCCA GCTCAAGGCG
CTGCCCGGCC AAGACAGCCT GCCGCCACAG GTGCATGAAC TGCGCCCCAT CCACAATGGC
TGGCTGAAAC GCAGACTCGC ATTTGTCTGG CTTCCGGCGC TGCTGACGAT GCTGATTTCC
CGGGAGCTGG TTGTTATCGA GCTCGCCCTG ACCGTGGCCA TACTGGGCTC GGTCGGACTT
TGGCTCAGGT TCAAACACTG GGGCTACCGG CACGACGATA CCCTGGTGTG GCAACGCACC
GGCCTGCTTG GCCAAAGTAT CAAAAGAGTG CCCCTGTACA AGGTGCAACA CGTGAGTCTG
CTTCAATCGC CCGGGCAACG GAAAAAAGGC TTGGCGACCC TGGAGCTCGG GCTTGCCAGC
GGTAAGATTT TCCTGCCCTG GATCCCCTAC AGCGAGGCCA GGACCATTGC TCTGGCCGCA
CTGACACAGC TGGACAAGCA CAGAGGTAAC TGGATTTAA
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| Protein sequence | MSATAENWQS LSPWSVVSFT LGTARQVLTQ GYALIPIVFT GWKQGFDSPL VISVALLVLL
GILTFALVQY ATYRFRPGSH KLEVRRGLFF KRKDELPLDK IQNVRLDQPF YFKPLLLCTL
VVETAGSRKD EVQIAAMPLS NAMALKSHLL QKPAEPVNHH EEQTDSLLLE RGGKPLFLFG
LYHNNFVWFM VFAGSIMGQL PVESWFESLG LNTFVRIESQ GPLWGTLSVI ALILLGYICF
ALISVLFAFL KYYPYRLKLG AESTLERTGG ILAHQQDALA MKRIQLVEFN QPPIARLLKR
WTVFFRQVQG HEVEQHLKLP LLIPSVTPDE LPPLFAQLKA LPGQDSLPPQ VHELRPIHNG
WLKRRLAFVW LPALLTMLIS RELVVIELAL TVAILGSVGL WLRFKHWGYR HDDTLVWQRT
GLLGQSIKRV PLYKVQHVSL LQSPGQRKKG LATLELGLAS GKIFLPWIPY SEARTIALAA
LTQLDKHRGN WI
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