Gene Sama_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2912 
Symbol 
ID4605159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3461840 
End bp3462370 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID639782323 
Producthypothetical protein 
Protein accessionYP_928784 
Protein GI119776044 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAC AAGATGCTGA ATTACAAGGG CTCTTGTTAC CCCGGGATCG CTGGACTCCC 
TTCGAAGCCG CCGTGCTCAT CCCGGCCGAT CCCCGCTATG CCACCCTGCT GATGGTCACC
ACGGCCATGA TATTTTTATT AATATTCCTG CCTCTGTCAT TGCTGCTTAT CTTTGCCGGA
GTGCCCGACA TGATAGTGCT GGCGATCAGC AGCATTGGCG TATCGCTGGC AGGCCTCAGC
CTGTGGCTGG GTCATCGCTG GGCCAATGCT CTGGGGTACG GCGTTGGCGA GCTGGACCTG
CTCAGCCAAA CCGGCGTGTG GTGGCAAAAG CGAACCGCCA TGCCTTACAG CCGTATCCAG
CACGTCACCC TGTCACAGGG ACCCTTGGAG CGGCGCTACG GCCTCGCCTG CGTCAAGTGT
TTCAGCGCTG GCAGCGGAAA CGCTGAAATT GAAATTCGTG GCCTGCCCAT CGACGATGCG
GAGGCGCTGC GGGGCCACCT GCTCGCCCGT GCTGGAGTAA CTGAACTGTG A
 
Protein sequence
MQAQDAELQG LLLPRDRWTP FEAAVLIPAD PRYATLLMVT TAMIFLLIFL PLSLLLIFAG 
VPDMIVLAIS SIGVSLAGLS LWLGHRWANA LGYGVGELDL LSQTGVWWQK RTAMPYSRIQ
HVTLSQGPLE RRYGLACVKC FSAGSGNAEI EIRGLPIDDA EALRGHLLAR AGVTEL