| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2892 |
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| Symbol | |
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| ID | 4605139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3434479 |
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| End bp | 3435288 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639782303 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_928764 |
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| Protein GI | 119776024 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTTG TAACGTTGCC GGGCCAAGGG CCCAACGGCA AGGTGTGGTT GGTGGGTGCC
GGTCCGGGAG ATGTGGAACT CCTGACCCTG AAGGCTGCCC GTATCCTGGC CAGCGCCGAC
GCCGTGCTCT ACGACGCACT TGTCAGTGAT GACATTCTCG CCCTCATTCC TGAACACGCC
GAGAAGATTG CCGTTGGCAA GCGCGCTGGC GCCCACAGTG CCCGTCAGGA AGACATTAAC
CAACTGCTGG TAACCAAGGC ATTTACCCGT AAAAACGTGG TGCGCCTCAA GGGCGGCGAC
CCCTTTATTT TCGGCCGTGG TGGTGAAGAG TTGCAAACCC TGGTCGAAGC CGGTGTGGCC
TTTGAGGTGG TACCGGGCAT TACGGCTGCA AGCGGCACCT CTGCCTATGC CGGCATTCCG
CTTACCCACA GAGACTTTGC CCAGGGCGTC ACCTTTATTA CCGGCCATTG CCAGCTCGAG
AGCCGTCCCA TGGACTGGCA GGGCTATGCC AATCCGGCCA ACACCCTGGT GGTGTACATG
GGCATTCTCA ACGCCGGACT CATCCAGCGC GAGCTGACCA AACATGGCCG CAGCGCCGCC
ACACCGGTAG CCATTGTCTC CCGCGCCACC ACCGCCCACC AGCAGCGGGT GATTGGCACC
CTGGGCGAGC TTGAAACCCT CGCCAAAGAT GCGCGGGTGG TGATGCCGGC ATTGATGATA
GTCGGGGAAG TGGTGAGTCT CGCCGACACA CTCAACTGGT TTGAACCCGC CCAAGTGGCC
GAGGTTCTGC CCAAACAGAA TACGAATTGA
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| Protein sequence | MDVVTLPGQG PNGKVWLVGA GPGDVELLTL KAARILASAD AVLYDALVSD DILALIPEHA
EKIAVGKRAG AHSARQEDIN QLLVTKAFTR KNVVRLKGGD PFIFGRGGEE LQTLVEAGVA
FEVVPGITAA SGTSAYAGIP LTHRDFAQGV TFITGHCQLE SRPMDWQGYA NPANTLVVYM
GILNAGLIQR ELTKHGRSAA TPVAIVSRAT TAHQQRVIGT LGELETLAKD ARVVMPALMI
VGEVVSLADT LNWFEPAQVA EVLPKQNTN
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