| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2874 |
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| Symbol | |
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| ID | 4605121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3411841 |
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| End bp | 3412686 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782285 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_928746 |
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| Protein GI | 119776006 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAAG AAAAACGTGG ATTTTCCCTC AGTGGCTATC TGGTGTTTGT GGTGCTGATT
GCCCTGCATC TGGTGTTTTT TGCCATGATG GCCACCACCT CTCAATATGG TGGCGTGATA
GGTAATGTAT TGACCGCCCT ATGCTGGCCC GGCTTTTTTA TGGTGCAGCC CAATCAGGCC
AAGGTGCTGA CATTGTTCGG CAGTTACGTG GGCTCGGTGA GAAACACGGG GCTGCGCTGG
ACCATCCCCC TCTTTGCCAA GCGCACCATC TCGCTGCGTA TCCGTAACTT CGAGAGTGCC
AAAATCAAGG TGAACGATAA CCTCGGTAAC CCCATCGAAA TCGCCACCAT AGTAGTGTGG
TCGGTTACCG ACAGTGCCGA GGCCGTGTTC GAGGTGGATG ATTACGAAAG CTATGTGTCC
ATTCAAAGTG AAGCGGCGCT TCGCAACATG GCCAGCAGTT ATGCATACGA TCCCCAGGAT
GAGAACGAAG TGGCACTCAG AAGCCATCCC CAGGCCATCG CCGATAAGCT CAAGCAGGAA
ATTCAGGAGC GTCTTGGCCG TGCCGGCGTC ACCGTACTGG AAGCCCGTAT CAGCCACCTG
GCGTATGCCC AGGAAATTGC CAGTGCCATG TTGCAGCGTC AGCAGGCCAC CGCCATCATC
GCCGCCCGGG CCAAAATTGT CGAAGGTGCA GTGGGCATGG TGGAAATGGC TCTGGAGCGG
CTAAAAGCCC AGAACGTGGT GGAGCTGGAT GAAGAGCGCA AGGCGGTGAT GGTGAGTAAC
CTGTTGGTGG TGCTGTGTGG TGATAAGAGT ACTCAGCCTG TTGTGAACAC GGGTTCCCTG
TACTGA
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| Protein sequence | MVQEKRGFSL SGYLVFVVLI ALHLVFFAMM ATTSQYGGVI GNVLTALCWP GFFMVQPNQA
KVLTLFGSYV GSVRNTGLRW TIPLFAKRTI SLRIRNFESA KIKVNDNLGN PIEIATIVVW
SVTDSAEAVF EVDDYESYVS IQSEAALRNM ASSYAYDPQD ENEVALRSHP QAIADKLKQE
IQERLGRAGV TVLEARISHL AYAQEIASAM LQRQQATAII AARAKIVEGA VGMVEMALER
LKAQNVVELD EERKAVMVSN LLVVLCGDKS TQPVVNTGSL Y
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