| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2849 |
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| Symbol | |
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| ID | 4605096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3388513 |
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| End bp | 3389403 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639782260 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_928721 |
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| Protein GI | 119775981 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.794351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.971286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCTG TTTTTCAGCT TCAGGCCCTG TGCGCCGCCG TGGAGAAGCC GTCACTGCGT
CAGGCCGCCG AGGCACTGTG CAAGACCCAG CCCGCCTTGA CCCATGCCCT CAAGCAGCTC
GAGTCGCAGT TGGGGTTGCC CCTGTTTAAT CGTGATGGCT ACCGCCTTGT GCTCACCGGC
AGCGGCGAGC GCATTTATCA GCTGGCGCTG AAAACCCTGG AGAGCCACGC TGAGCTTGAG
CAGCTGGCGC AGCATTTGGC CAGAGGGGAC GAAGACCGGG TGGTACTGAC GGTGGAGGCC
TCATTCGACC TTACGCCTAT CCTAAGTGCG CTGGAGTCGG TACAGGCCGA GTTTTCACAA
ACCGAAATCG TTATTCAACA GGAATACCTC ACAGGTGCGG TTGAGCGGGT GCAGCAGGGA
CATGCCAATC TTGCCATTAC ACCGCTGGCA CCGGCGCTGA GTCCGGGTAC CCGGCTCGAT
ACCCAGCCTC TGAGTCAGGG GCAGATGCTC AATGTGGCCG CCCCTAGGCT GCTTGCCCGC
TATCCGTCGC TCTGCAGCAT ACTTGAGCTG CGAAAAGAGT ATCAAATCCT GGTGCAGGAT
TCGGGCAGCG GCACCCTCGG GCTCAAACTT GGCGTGCAAT CCGCCCAGCG CCACTGGTAT
GTCAACAGCT TTGCCACCAA GCTCTCCTTG ATTGAACAGG GGATGGGCTG GGGGCGCCTG
CCCGAATGGA TGCTGACAGA GGCCCTGGCC GCAGGGCGAC TTCAGCTGCT GGAGCTGGCC
GATTTTCCCG CGCGGCAGCG ATTTGATTAT CATCTGGTTC GCCGAAGCGC CTCAGTGCCC
GGCCCGGTAG CGACCAGGCT TTGGCAGCGC CTTGGCGGCG GCGCGCTTTA A
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| Protein sequence | MPSVFQLQAL CAAVEKPSLR QAAEALCKTQ PALTHALKQL ESQLGLPLFN RDGYRLVLTG
SGERIYQLAL KTLESHAELE QLAQHLARGD EDRVVLTVEA SFDLTPILSA LESVQAEFSQ
TEIVIQQEYL TGAVERVQQG HANLAITPLA PALSPGTRLD TQPLSQGQML NVAAPRLLAR
YPSLCSILEL RKEYQILVQD SGSGTLGLKL GVQSAQRHWY VNSFATKLSL IEQGMGWGRL
PEWMLTEALA AGRLQLLELA DFPARQRFDY HLVRRSASVP GPVATRLWQR LGGGAL
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