Gene Sama_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2808 
Symbol 
ID4605055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3347641 
End bp3348246 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content58% 
IMG OID639782219 
Producthypothetical protein 
Protein accessionYP_928680 
Protein GI119775940 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.994405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCT CACTGCGCCC CTCAAAGAAG GCGCTTTCCA TCGCCAGGAC GCTCCATGTT 
TATGTGTCGA TGGCACTCTT GCTGCTGATG CTGTTTTTTG CCTTTACCGG CATCACGCTC
AATCACCCTG ACTGGTTTGG TGCATCCACC GCCAACAGCC ATACCGAGTC TGTGGCGCTG
CCCGACTTTC TCCTGCCTAT TGCAGCCGAA GACCAACACT GGCAGGAGGC CGCCGCCCAT
TGGATGGCGA GCCAGTGGCA GGGCCAGCGC CAACAGGTTG AGGTGAGTAT CGACGAGCTG
GTGCTCATTC AAAAGGGACC CGGTCGCTAT CGCACCGTAC TGCTGGATAC CGAAATGGCC
CAAGTGCAGG TGGAGAGCCT GGATTATGGA CTGGTCGCCG TGCTTAACGA TTTACACAAG
GGCCGCAACA GCGGCGGGAT CTGGAGTCTG GTGATTGATG CCAGCGCCAT ATTGATGCTG
CTGTTTTCCC TGACCGGGGC CTTTTTGCTG TTGCCCCAGA GTCGCAGACT CAAACGTTCC
CTCGGCTATA TGGGCGGCGT CACCGCCGCG TGTGTGGCCA TCTATTGGTT ATCGATTCCC
GGATGA
 
Protein sequence
MSASLRPSKK ALSIARTLHV YVSMALLLLM LFFAFTGITL NHPDWFGAST ANSHTESVAL 
PDFLLPIAAE DQHWQEAAAH WMASQWQGQR QQVEVSIDEL VLIQKGPGRY RTVLLDTEMA
QVQVESLDYG LVAVLNDLHK GRNSGGIWSL VIDASAILML LFSLTGAFLL LPQSRRLKRS
LGYMGGVTAA CVAIYWLSIP G