| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2797 |
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| Symbol | |
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| ID | 4605044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3337461 |
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| End bp | 3338297 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782208 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_928669 |
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| Protein GI | 119775929 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.454045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTA AGGCATTGAA TTACTTCGTC GCAGTCTTGG AAAGAGGCAG TATCAGCGCC
GCCGCCAAGC ATTGCTACAT AGCACAGCCC TCGATTTCGG CAGCCATTGG CGCCCTGGAG
TCTGAACTGG GCGTGCAGCT TTTTGCCCGG CACGGGAAAG GGGTATCGGC CACCGATGCG
GGCATGCGTT TGTATCCTCT GGCCAAACGG CTCCTGAACG AATCCAAGGC CATTCAGTCG
CTGTTTTCCA AGCCAGAAAC CCAGGTGCCA TTCAGACTGG GGCTTATCCG CTCGCTGGGG
GTTTCACGCA TGAGTATGCT GCTCAAAGAC TTTACCGCGG CCTGCCCTGA CATGGATTTA
ACCCTGGTTG AGCCGAGCGA AGAGTGCGAC GGCCGCATCA TTACCACCGC CGATTTAACA
CCCAACGAAA GCTTTCAGGC CATGTGGCAC GATACGTATT TGCTGGCCAT TCCTCCGGCA
TTGAGTCTGG CGCTGAAAAG CAGCATCCGA CTGGAAGATT TACAGGGACA ACCTTTTATT
CACAGAGCCC CCTGCGAGGC ACTCACCAGC CTGCAGCAAC TTTTGGACAT GGAAGGGATA
AAGATGCAGG TGCGGGCCCG TATTCAGACC ATAGAATATG CGGTGGGATT GGTTGCGGCA
GGATTAGGCA TTGCCTTGGT GCCCGCCATT CCGGCATTGC TGGACCAGCA GGACATAGTG
TTTCGGCCAC TGGCAGACAT AGATCTTAAA CGTACCGTGG GGCTGGCGCT ACCTCTGGGG
CACCCTCCCA CGCCTCAGCA GCGACAACTG GTCGCCCTTT GCCGACAATG TCACTAA
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| Protein sequence | MNLKALNYFV AVLERGSISA AAKHCYIAQP SISAAIGALE SELGVQLFAR HGKGVSATDA
GMRLYPLAKR LLNESKAIQS LFSKPETQVP FRLGLIRSLG VSRMSMLLKD FTAACPDMDL
TLVEPSEECD GRIITTADLT PNESFQAMWH DTYLLAIPPA LSLALKSSIR LEDLQGQPFI
HRAPCEALTS LQQLLDMEGI KMQVRARIQT IEYAVGLVAA GLGIALVPAI PALLDQQDIV
FRPLADIDLK RTVGLALPLG HPPTPQQRQL VALCRQCH
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