Gene Sama_2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2790 
Symbol 
ID4605037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3330555 
End bp3330977 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content52% 
IMG OID639782201 
Producthypothetical protein 
Protein accessionYP_928662 
Protein GI119775922 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3615] Uncharacterized protein/domain, possibly involved in tellurite resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA TACCGAAAAA TTATGTTCCA GTGGGTTCCA CCCGGATATT CGGCGGTAAT 
GATATACCTG AAATGCTGTT GTCGCAGCAT CGTACCCGAA ATGGCTTTTA CAGCCAGATT
GAGGTCATTG AAGGTGAGCT CTTATGGCAA GGTTTTGGCG ACACAGATGG CAAGCCCGGT
ATTGAGGTGC ACCTGCGCGC CAACGACAGG GCCATGACCC ACCCCGGCAA GTGTTACAGC
GTGAAGCTGC TCAGCGATGA GACCCGTTTC AGACTCAATG TGTTTGCCCA TCAAAGCCTG
CAGGAAAGCA ATGTCGATGT CAGCAGCACA GTGGGGCTCT TTCTCGAACC CCTTGCTCCG
GACCTGACGC CTGTGGCTAA ACAGACTGAG GATACTGATT GCGAACTTCA GGCAGATCGC
TGA
 
Protein sequence
MALIPKNYVP VGSTRIFGGN DIPEMLLSQH RTRNGFYSQI EVIEGELLWQ GFGDTDGKPG 
IEVHLRANDR AMTHPGKCYS VKLLSDETRF RLNVFAHQSL QESNVDVSST VGLFLEPLAP
DLTPVAKQTE DTDCELQADR