| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2753 |
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| Symbol | |
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| ID | 4605000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3291091 |
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| End bp | 3292563 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782164 |
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| Product | Na+/H+ antiporter |
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| Protein accession | YP_928625 |
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| Protein GI | 119775885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.709731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA AGCATTTGAA TGGGGGAGTC CATCGTATCG CAGGGATGGC GATTTCTTTC
ATGTTGGCGC TGTTTGCGCC TGCGGCTTTG GCAAGCAGTG GTAGCGGTGG TGAATGGCTC
GATTTGACCG GCGCCACTGT GGGATACCTG GCCATCACGA TTTTCGTATT GGCCTATATC
CTGGTGATGC TGGAAGAGAA GCTGCATCTG CGCAAGTCCA AACCGGTGCT GGTGGCTGCC
GGGATTATCT GGGGCATGTT GGGATTTGTC TATTCTCAGC ATGGCATGCC TCAGGTGGCT
GAAGAGGCCT TTAAGCACAA CCTGCTGGAA TATGCTGAGC TGCTGCTGTT CCTCTTGGTG
GCCATGACCT ATATCAACGC CATGGAAGAG CGCGGCCTGT TCGATGCCTT GCGTGCCTGG
ATGGTGAGTC GGGGCTTTAG CCTGCGCCAG GTGTTCTGGC TTTGTGGCAT TCTGGCCTTT
TTTATCTCGC CGGTGGCGGA TAACCTGACC ACGGCACTGC TGATGTGCGC CGTGGTGATG
AAGGTCGGTG GCGATAATCG TCGCTTTATC GGCATTGCCT GTATCAATAT TGTGGTTGCG
GCCAACGCAG GCGGCGCCTT CAGTCCCTTT GGTGATATCA CCACCCTGAT GGTGTGGCAA
AAGGGCATAG TGCCCTTTGG TGAGTTCTTT GACCTCTTCA TTCCTGCCGT TGTGAACTTT
ATGGTGCCGG CGCTGGTGAT GAGCTTTTTT ATCGGTAACG AGCGGCCTGC AGCCGTATCG
GAGCGGGTAT TTATGCGCCG CGGTGCCAAG CGCATTGTCG CCTTGTTTTT ACTGACCATC
GCCTCAGCAG TATTGGCGCA TTCTATGCTG GGCATGCCAC CTGTGCTGGG GATGATGACA
GGCCTTGGAT TCCTGCAATT CTTTGGCTTT TTCCTGCGCA AAACCTTCAA CCACTCCGTT
GCCAAGGCGA TTGCCAAGGC CGAAGCCGAG AAAAACCGGG AGCGTTTGAC TTACTTGGGT
AACGTGGTTC CTTTCGATGT ATTCAGCCGG GTAGCGCGCG CCGAATGGGA TACCCTGCTG
TTTTTCTACG GGGTGGTGCT CTGTGTGGGA GGTCTGGGCT TTATGGGGTA TCTCAGCCTG
GTATCTGAAG CCATGTATAC CCATTGGGAT GCCACCTATG CCAACATCAC GGTCGGCCTG
TTGTCCGCCG TTGTGGACAA TATCCCTGTG ATGTTTGCCG TACTGACCAT GAATCCGGAT
ATGGCACTGG GGCAGTGGCT GCTGGTTACC CTGACCGCCG GTGTGGGCGG CAGCCTGCTG
TCTATTGGCA GCGCCGCCGG GGTGGCACTC ATGGGGCAGG CGCGTGGGAT ATACACCTTC
GGCACTCATC TCAAGTGGAC ACCTGTGATT GCCCTGGGGT ACGTCGCGAG CATTCTGGTG
CACATGTGGT TGAACGCCGC AACCTTTCAT TGA
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| Protein sequence | MKAKHLNGGV HRIAGMAISF MLALFAPAAL ASSGSGGEWL DLTGATVGYL AITIFVLAYI
LVMLEEKLHL RKSKPVLVAA GIIWGMLGFV YSQHGMPQVA EEAFKHNLLE YAELLLFLLV
AMTYINAMEE RGLFDALRAW MVSRGFSLRQ VFWLCGILAF FISPVADNLT TALLMCAVVM
KVGGDNRRFI GIACINIVVA ANAGGAFSPF GDITTLMVWQ KGIVPFGEFF DLFIPAVVNF
MVPALVMSFF IGNERPAAVS ERVFMRRGAK RIVALFLLTI ASAVLAHSML GMPPVLGMMT
GLGFLQFFGF FLRKTFNHSV AKAIAKAEAE KNRERLTYLG NVVPFDVFSR VARAEWDTLL
FFYGVVLCVG GLGFMGYLSL VSEAMYTHWD ATYANITVGL LSAVVDNIPV MFAVLTMNPD
MALGQWLLVT LTAGVGGSLL SIGSAAGVAL MGQARGIYTF GTHLKWTPVI ALGYVASILV
HMWLNAATFH
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