| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2743 |
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| Symbol | |
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| ID | 4604990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3278415 |
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| End bp | 3279641 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782154 |
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| Product | hypothetical protein |
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| Protein accession | YP_928615 |
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| Protein GI | 119775875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC GGGCCCCTAT GAGCACTATG TTAAGACGTA TCCTCCCCTT TATTATTCTC
GCGCTGTTTA TTCTGGCCGC CATGGTACTC ATGGCCACCA AAGAAGCCCC CGAGCAGAAA
GCCGAAGAAG CCAATTTGCC AATTATTGAA GTGGCTGAGG TGAAACAGGA AACGCTGTCT
CTGAATCTGC CTTCTTACGG GGTGGTTATG CCAAGGCATA AAACACAGCT GGTGGCCGAA
GTGCAGGGGC GTCTGACAAG TGTATCCCCT AATTTTGTCG CTGGCGGTGT GGTGAAAGCC
GGTGACCAAC TGGCGGTGAT TGAGCCGTCA GACTATCAGG CCGACCTGAT GCAGGCCGAA
GCTTCACTGG CACAGGCTAC CGCCGCACTC AATGAGGAAA TCGCCCGCGG GGAAGTGGCC
AAAACCGAAT TCAAGGGATA TGACAAGGGT GTCCCCCCGG AACTGGGTTT GCGTATTCCA
CAGCTGAAAA AAGAACAGGC CAATGTGAAA TATGCCGAAG CGGCACTGGC CCGCGCCAAG
CGTAATCTGG AGCGCACCGT TATCCGCGCG CCGTTTGACG GCATAGTCAA AGCCCGTGGT
GTCGACCTGG GGCAATACGT CACCCTCGGC ACCAAGCTGG GTGAGCTATA CGATACCAGT
GTCGCCGAAA TCCGCCTGCC ACTGGCCAAT GCCGACCTCG CCTATCTTGA GTCGGTAGAC
AACCCCGACA CCGAAGTGAC CCTGACAGCC TCCCTGGCCG GTCGCGAAGT GGTATGGACC
GGTGACATAG TGCGCAGTGA AGGGGTAATC GATGAAGGTA ACCGCATGGT CTATCTGGTG
GCGGAAATTC CAGACCCTTA CCTGCGCAAG CATAAAACCC AGGGCCAACT GCCGCTCAAG
TACGGTACCT TCGTCAACGC CATCATCAAG GGCCGTACCG AGGACGGTAT AGTGCGTCTG
GACCGCCATC TGGTGCGTGA GGGCAAGGTG CCGGTCGTTC GCAGCGACAA CACCCTGGAG
CTGCGCGACG TGAATGTTGT GCGCTCGGAT CTGAACTACG CCTACATCAA GGGCAGCCTC
AAAACCGGAG AGCGCGTTTC CTTGACCAAC ACAGGCACCC TGTCCACTGG TCAGATGGTG
AAAATCCGCG GTGAAGAAAC CCCAGACAGC ACCAGAGACA GCGAGGCGCC CGCCGATGAG
CGTCTGGCAC AGGCAGGGGA TAAGTAA
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| Protein sequence | MDKRAPMSTM LRRILPFIIL ALFILAAMVL MATKEAPEQK AEEANLPIIE VAEVKQETLS
LNLPSYGVVM PRHKTQLVAE VQGRLTSVSP NFVAGGVVKA GDQLAVIEPS DYQADLMQAE
ASLAQATAAL NEEIARGEVA KTEFKGYDKG VPPELGLRIP QLKKEQANVK YAEAALARAK
RNLERTVIRA PFDGIVKARG VDLGQYVTLG TKLGELYDTS VAEIRLPLAN ADLAYLESVD
NPDTEVTLTA SLAGREVVWT GDIVRSEGVI DEGNRMVYLV AEIPDPYLRK HKTQGQLPLK
YGTFVNAIIK GRTEDGIVRL DRHLVREGKV PVVRSDNTLE LRDVNVVRSD LNYAYIKGSL
KTGERVSLTN TGTLSTGQMV KIRGEETPDS TRDSEAPADE RLAQAGDK
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