| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2713 |
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| Symbol | |
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| ID | 4604960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3244382 |
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| End bp | 3246451 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782124 |
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| Product | thiol:disulfide interchange protein |
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| Protein accession | YP_928585 |
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| Protein GI | 119775845 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCACCTTTTG GTTTCACATC CTCGTGGGTT GCATCCTGTT GGCATGTTTG
CCTGCAATGG CAAGCGACGG CCCGGACCAA AAGATAGCGG CATCGCTGCT GCTGGAATCA
AACACTCCGG CGTCCGGGAC CCAGACCTCC CTGGCTGTCC GTATGTCGCC CGAAGCGGGA
TGGCACGGTT ATTGGCTCAA CCCCGGTGAC GCCGGTTTCC CGCTGCAGCT GCAATGGCAA
CTGCCGGAGG GGGTCACAGT GGGAGAACTG CAATATCCTG CCCCCGAGTC CCTGTTGATA
AGCGGCATGA TGAATTACAT CTATCACGGT GACTATGCCT TGCTGGCACC ACTGCAGATT
GCCGATGACA TCGCCGCGGG TACCGCCATT GATGTTGCGG TGGAACTGCG CTATCTGGTG
TGCAGTCCCA CGCTGTGTTT ACCCGAGCAG CAGCGGCTCG AAACCCACTT TATTGTTGGC
GACAAGGGCG CGCCCAAGAC ACAGCAGGCC GCCTTTAATG TCTGGCGTCA AGCTATCCCA
AAACCCGTGG CGGCCAGCGC TGATTTCACT GTCCGCGATG GGCTATTTGT GTTGTCGCTG
CCCCTGCCCG AAACCGCTTC CGTGACTGAT AATCTGCACT TTTACCCTGA GGTCAATGGC
GCGCTGTCCA ATACGGCGCC GCAATCCTTT GTGCAAAAGG GTGACCGCCT CTTTATGCAG
ACCCAGGCCG GTGAGGGGGA TGTCAGTGAC TTTCATGGGG TGCTGACACT GGATAAAGGC
CTGGCTATCC GGGTCAAGGC GACCGGGCAG GCGGGCGGTG CATTGATGTT CCCAACCGAA
GCCGGTTTAC CGGCTGCGCA AGAGGGCTCG CTGCTGTCCC TGTCTGTGGT GGCCGTGTTG
GGAGCCGTGC TCGGAGGATT ACTGCTGAAT CTGATGCCCT GCGTCTTTCC CATTCTCAGC
TTAAAAGTGC TGAGTCTGAC TCACATGGGG GACGAGCGAC TTGCCCGGCG CGGCGCTGTG
GCATACACAC TCGGCGCCGT CTTGGTGTGC GTAATGCTGG GAGCCCTTAT TCTGGTGCTG
CGGCAGTTCG GTTTACAGGT GGGCTGGGCC TTTCAATTGC AGCGGCCTGA AATCATAGTG
GCGCTTATTC TACTGATGAT GGCCATAGGG CTGAATCTGG CCGGTTTGTT TGAAATGGGC
ACCCTGAGTT CGGGCAGTCG CCTGCAGCAG CAACAAGGAC CGGCGGGGGA TTTTTGGACC
GGTGTGCTGG CTGCCTTTGT GGCCACCCCC TGTACCGGGC CTTTTATGGC CACAGCTCTG
GGGGCGGCGC TGGTGCTGCC GGCTTACGTT GGGCTCATGG TGTTTGCCGG TTTGGGTCTG
GGCATGGCTT TGCCCTTTTT GCTGGTGGGC TTTGTACCGG CACTGCGTCA GCGAATGCCT
AAGCCCGGTG CCTGGATGGT GACAGCGAAA CGCATTTTTG CTGTGCCCAT GTTGCTTACG
GCCCTTGGAC TGGTGTGGGT GCTGATGCAG CAGACTGACC GCCAATATGT GTTTGTTGCC
TTGCTGCTGG CAATGCTGCT GGGTCTTGCT CTCTGGCTGA TGGGATTGCT CCAGCATGGG
GGCCGAGAGA GGCCCTGGTG GCCAGCGCTG CTGGCGGTCA TTATTGTCGC CGGCACCCTG
CTCAGCGTAT CGCCGGGGGC AGAGACTCAG ATATCGAAGG CAGGTGCCGA GACAAACAGG
CCACTGACAT TTAACGAGAA GGACTTGTCG GCGCTGATCA TGGAGCAGGA TGTGTTTGTG
TATTTCAGTG CCGATTGGTG CCTGACCTGT AAAGTGAATG AAACAACGGC CATTGAGCGG
CAGGACACCC AGGCGGCCTT CGAGCGTGCA GGGATGGCCG TGATGCTGGG CGACTGGACC
AATGGCGACC CGCAGATTAC CGAGTTTCTT GCAAAACATC AGCGTTCTGG TGTGCCTTTA
TATCTTTGGT ATAAAAAGGG AAATCTACAG CCAGAGGTGT TGCCGCAAAT ACTGACATCC
TCACTGCTGA TTGAAAGGGC GGGTGGTTGA
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| Protein sequence | MKIITFWFHI LVGCILLACL PAMASDGPDQ KIAASLLLES NTPASGTQTS LAVRMSPEAG
WHGYWLNPGD AGFPLQLQWQ LPEGVTVGEL QYPAPESLLI SGMMNYIYHG DYALLAPLQI
ADDIAAGTAI DVAVELRYLV CSPTLCLPEQ QRLETHFIVG DKGAPKTQQA AFNVWRQAIP
KPVAASADFT VRDGLFVLSL PLPETASVTD NLHFYPEVNG ALSNTAPQSF VQKGDRLFMQ
TQAGEGDVSD FHGVLTLDKG LAIRVKATGQ AGGALMFPTE AGLPAAQEGS LLSLSVVAVL
GAVLGGLLLN LMPCVFPILS LKVLSLTHMG DERLARRGAV AYTLGAVLVC VMLGALILVL
RQFGLQVGWA FQLQRPEIIV ALILLMMAIG LNLAGLFEMG TLSSGSRLQQ QQGPAGDFWT
GVLAAFVATP CTGPFMATAL GAALVLPAYV GLMVFAGLGL GMALPFLLVG FVPALRQRMP
KPGAWMVTAK RIFAVPMLLT ALGLVWVLMQ QTDRQYVFVA LLLAMLLGLA LWLMGLLQHG
GRERPWWPAL LAVIIVAGTL LSVSPGAETQ ISKAGAETNR PLTFNEKDLS ALIMEQDVFV
YFSADWCLTC KVNETTAIER QDTQAAFERA GMAVMLGDWT NGDPQITEFL AKHQRSGVPL
YLWYKKGNLQ PEVLPQILTS SLLIERAGG
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