| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2712 |
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| Symbol | |
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| ID | 4604959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3243345 |
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| End bp | 3244244 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782123 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_928584 |
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| Protein GI | 119775844 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.974943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAA AAGAACCTGT CGACAGTCTC TGTGTTGCAC TGGCCAGCGC GGTGGCCCAT
CACACTGAAG GAGAGGAATG GGCCTCCACG GCTATTGAAG GGCTGGAGTT TTATCGTCAA
CCCGCACCGA CGTCCTGCGC TATATGCGTT GTGGAGCCGA GCATCGCCTT GGTGGTACAG
GGGGCGAAAA GCATGACATT AGGCGAACAG AGTTACCGAT ATGATACCCG CCGCTTTCTC
ATCACCTCTT TGGATTTACC GGCCAAAATG CAGGTTCTGG AAGCCAGTGA GGAACAACCT
TATCTGGGCA TTGTCCTCAA GCTGGATTTG GCCATGATGA GCGAACTGAT TCTGCAGGCA
CCACCGCATC CACATAAAGA CCCCACCTCA GAATACGCCA TGGTGCTTGG CAATACCACA
CCTTCACTGC TGGATGCCGT TCAACGTCTG GTGGCATTAC TCGATGAACC CGAATCCATT
GCGGTACTCG CGCCCCTTAT CAAACAGGAA ATTTTTTGGC GGGTTCTTAT CAGCGAACAG
GGAAGTCGAT TGCGGCAGAT AGCATCGGTG GGCAGCCAGG GGCTGCGGAT TGCCAAGTCC
ATCGAATGGC TGAAATCACA TTATGATCAG CACCTGAGTG TGGATGGGCT GGCCGACTTG
GCCCGCATGA GCAAATCGAC GTTCCATCAT CACTTTCGTG CGCTCACCTC CATGAGTCCG
CTGCAGTATC AAAAACGCCT GAGACTGCTG GAAGCCCGCA GATTAATGCT CGGCGAAAAC
ATGGATGCCT CTGCTGCGGC CTACCGGGTC GGCTACGAGA GCCCATCACA GTTTTCGCGG
GAATACGCAC GCCTCTTTGG CAATCCGCCA AAACGTGACG TCACAGCCCA CTGGCAATAG
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| Protein sequence | MLKKEPVDSL CVALASAVAH HTEGEEWAST AIEGLEFYRQ PAPTSCAICV VEPSIALVVQ
GAKSMTLGEQ SYRYDTRRFL ITSLDLPAKM QVLEASEEQP YLGIVLKLDL AMMSELILQA
PPHPHKDPTS EYAMVLGNTT PSLLDAVQRL VALLDEPESI AVLAPLIKQE IFWRVLISEQ
GSRLRQIASV GSQGLRIAKS IEWLKSHYDQ HLSVDGLADL ARMSKSTFHH HFRALTSMSP
LQYQKRLRLL EARRLMLGEN MDASAAAYRV GYESPSQFSR EYARLFGNPP KRDVTAHWQ
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