Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2711 |
Symbol | |
ID | 4604958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3242612 |
End bp | 3243124 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639782122 |
Product | hypothetical protein |
Protein accession | YP_928583 |
Protein GI | 119775843 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.903036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCCT CTGGCCTGAT TGTGTTCATC ACTCTTCCCC TGCTATTCCT TGCCCATAGC CCGGAGGCGG CGGAGCAGCA CGGGACCGGC ATGCAAATCC GGGTGGAATC GGCCGACAGT CGGGAGCCGA TTCAGGGCCT GGATGCGTTT TTTACCGGCA AGGTAAAGGT AGAAGCGCTG TTCAGTGCCC AGGGGGAAGC CCGAAGCTCG GGCGCCAATG TGACCTTTGA GGCGGGGAGT CGCACCCATT GGCATACGCA CCCGATTGGG CAAACCTTGA TAGTGACCTC AGGAACAGGC TGGGTGCAGC AAGAAGGGAG TGCGCGTATA CAGATTCAAA CGGGCTCTCT GGTGTCGATT CCGGCCAATG TGGTCCACTG GCATGGGGCG ACTTCATACA CCAGCATGAG CCATATCGCC ATTCAGGAAG TGCAAAACGG CAGTGCAGTG ACCTGGCTTG AGGCGGTGAC GGATGCACAG TACCTGAATG CGGCCTTACC CGGTTCCCGT TGA
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Protein sequence | MRPSGLIVFI TLPLLFLAHS PEAAEQHGTG MQIRVESADS REPIQGLDAF FTGKVKVEAL FSAQGEARSS GANVTFEAGS RTHWHTHPIG QTLIVTSGTG WVQQEGSARI QIQTGSLVSI PANVVHWHGA TSYTSMSHIA IQEVQNGSAV TWLEAVTDAQ YLNAALPGSR
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