Gene Sama_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2711 
Symbol 
ID4604958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3242612 
End bp3243124 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content59% 
IMG OID639782122 
Producthypothetical protein 
Protein accessionYP_928583 
Protein GI119775843 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.903036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCCT CTGGCCTGAT TGTGTTCATC ACTCTTCCCC TGCTATTCCT TGCCCATAGC 
CCGGAGGCGG CGGAGCAGCA CGGGACCGGC ATGCAAATCC GGGTGGAATC GGCCGACAGT
CGGGAGCCGA TTCAGGGCCT GGATGCGTTT TTTACCGGCA AGGTAAAGGT AGAAGCGCTG
TTCAGTGCCC AGGGGGAAGC CCGAAGCTCG GGCGCCAATG TGACCTTTGA GGCGGGGAGT
CGCACCCATT GGCATACGCA CCCGATTGGG CAAACCTTGA TAGTGACCTC AGGAACAGGC
TGGGTGCAGC AAGAAGGGAG TGCGCGTATA CAGATTCAAA CGGGCTCTCT GGTGTCGATT
CCGGCCAATG TGGTCCACTG GCATGGGGCG ACTTCATACA CCAGCATGAG CCATATCGCC
ATTCAGGAAG TGCAAAACGG CAGTGCAGTG ACCTGGCTTG AGGCGGTGAC GGATGCACAG
TACCTGAATG CGGCCTTACC CGGTTCCCGT TGA
 
Protein sequence
MRPSGLIVFI TLPLLFLAHS PEAAEQHGTG MQIRVESADS REPIQGLDAF FTGKVKVEAL 
FSAQGEARSS GANVTFEAGS RTHWHTHPIG QTLIVTSGTG WVQQEGSARI QIQTGSLVSI
PANVVHWHGA TSYTSMSHIA IQEVQNGSAV TWLEAVTDAQ YLNAALPGSR