| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2631 |
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| Symbol | |
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| ID | 4604878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3150304 |
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| End bp | 3152244 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782042 |
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| Product | TonB-dependent receptor domain-containing protein |
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| Protein accession | YP_928503 |
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| Protein GI | 119775763 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.221793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACCA AACCTTCTTT GATTTCATTG GCACTGGCCA CAAGCCTGCT GTCATCTTTC
GCCTCAGCAC AGAGCAGTGT GGATGAACAT CTGGTGGTCA TTGGCCGTCA GGCCGATACC
CCCCTGAATA TTGCCGCGAA TGTTGCTGTG ATTACCGCAG AAGACATTGC CTTGAGCGGT
GCAACCAGCC TTGCCGGATT GCTGCGTGGT CAGAGTGCCA TCCAGATAAG CGACAGCGGC
ACAGGGCCAG TCTTGGCCAT GCGCGGCTTT AGTGCTGGCC AGGCAGCCAA CAACACCCTG
GTGCTGGTGG ATGGTCGCCG TCTCAACAAT ATTGATATAG CAGCGCCCAG CCTCAATGCC
GTGTCCCTGA GTCAGATAGA ACGCATTGAA GTGCTCTCCG GCAGCGCCGG TGTGCTCTAT
GGCGATCAGG CCGTTGGCGG CGTCATCAAT ATCATCACCA GGCGCAGTCA GGAAAACACC
GGCGGCGCCT CGCTCACCGG TGGCAGTTTC GGCACCCTTG GCACAGCTAT GGATGTTTCG
GCGGCGCTGA ATGAACGCTG GAATCTCTTC GTGGGTGGTA ACTTCGATAA GAGCGACAAC
TATCGTGACC ATGCCGTCAG TGAGTCTGGC TCAGTGCTGG GCCGCATCGA ATACCGTGGC
GATGGGCAGC GCTTCTTTGC TGAAGCTTCC TATTATGATG ACGACCGCGA ACTTGCAGGT
TCACTCACCG CAGAGGAGCT TGCCGCCAAT CCCCGCCAGG CGAATGCTGC CAACAGCAGC
GACTATCAGC ACAACCTGAC CAAGGCCGGC CGATTGGGAT ACGAGCACAG TCTGACCGAA
CATTGGACCC TGGCTGCCGA CTTCGATGCC AGTGATACCC AAGTGAATTA CATCAGTTGG
GGCGGCGCGG GCGAAACCGA GCGTCAACTC ATCAGCCTGA CTCCCAAAGC GATTGGCCGC
TACCAGACAG AGGCGGGCGA ACTCAAGTTG GTAACAGGTG TGGACCTGTC TCGTGGCGAG
TCAGAATTTA CTTCGGCTTA TATGGAACGC GGCAACACCC AAGAGCATTG GGCTGCTTTT
GCTCAGGCAT CAGTACCTTT GACCAAGTCG CTGAGTTACG TGGTGGGTGG GCGTTATGCC
GAAGTTCAGG ATGAAATTCG CGATCAGAGT ACTTTCCCTC TGGGTGGCAA GCTGGATAAC
GACGCCCATG CGCTTGAGCT TGGATTAAAT TATCGCCCCG TGCAGGGACA CAGATTCTAC
TTGCGCGCCG AAGATAACTT CCGTTTTGCC AAGGTAGATG AGCAGGCCTA CACCAGTCAG
GCCAGTCTGA GACCCCAAAC AGGCCGAAGC TATGAAGCCG GCTGGGATTA TCAGGGTGCT
CAGCAGGCAT TGCGCCTCAG TCTCTACCGT TTAAGCCTGG AAGATGAAAT TGTGTTTGAT
CCCAGCGCCG ACACTCCGGT GGGGGGCTAT TTCCCGGGTG CCAATATCAA CGCCGATGAG
TCGCGCCGTT ATGGTGCCAT GTTGGACTGG GACTGGCAGC TGAATGACAC CATCAGCCTG
GGCATAGATT ACCAATACAC GGATGCTGAA TTTACTGCCG GGCTGAATGA TGGCAAGGCG
TTGTCCTGGG TCGCCGAACA CAGTGGCCGT ATGTATGTGT CAGCTCAGTT TGCCGAGTAT
TGGTCGGCCT ACGTAGATGC CGCCTACACG GGTGAGCGTT TTGTTGAAGG TGACAACGCC
AATATGGGCG AGCAGATGGA TGCCTTTTGG CTGACCAATG CCGCAGTGAG TTTCCGTAAG
GATGCCCTGA TTGCGACGCT GAGACTGGAT AACCTGTTTG ATGAAACGTA CGCGGCCTCA
GGCTTCTACA GTGATTGGGG TAATGGATAT TATCCAGGCG AAGGTCGCAA AGTGAGCCTG
ACACTGGGAC TGAAATACTG A
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| Protein sequence | MGTKPSLISL ALATSLLSSF ASAQSSVDEH LVVIGRQADT PLNIAANVAV ITAEDIALSG
ATSLAGLLRG QSAIQISDSG TGPVLAMRGF SAGQAANNTL VLVDGRRLNN IDIAAPSLNA
VSLSQIERIE VLSGSAGVLY GDQAVGGVIN IITRRSQENT GGASLTGGSF GTLGTAMDVS
AALNERWNLF VGGNFDKSDN YRDHAVSESG SVLGRIEYRG DGQRFFAEAS YYDDDRELAG
SLTAEELAAN PRQANAANSS DYQHNLTKAG RLGYEHSLTE HWTLAADFDA SDTQVNYISW
GGAGETERQL ISLTPKAIGR YQTEAGELKL VTGVDLSRGE SEFTSAYMER GNTQEHWAAF
AQASVPLTKS LSYVVGGRYA EVQDEIRDQS TFPLGGKLDN DAHALELGLN YRPVQGHRFY
LRAEDNFRFA KVDEQAYTSQ ASLRPQTGRS YEAGWDYQGA QQALRLSLYR LSLEDEIVFD
PSADTPVGGY FPGANINADE SRRYGAMLDW DWQLNDTISL GIDYQYTDAE FTAGLNDGKA
LSWVAEHSGR MYVSAQFAEY WSAYVDAAYT GERFVEGDNA NMGEQMDAFW LTNAAVSFRK
DALIATLRLD NLFDETYAAS GFYSDWGNGY YPGEGRKVSL TLGLKY
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