| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2610 |
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| Symbol | |
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| ID | 4604857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3126737 |
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| End bp | 3127690 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782021 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_928482 |
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| Protein GI | 119775742 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.329826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCGATGGCAA CCAGGTGCAA CAAAAGTTGA CGTTTCCACC CCTTGTCGAA
GCGCTAAGGC AACAACTGTG CCGCCCATTT ACCATGCCCC AGCGCCAGGT GTACGCGCTG
TCAGACACTG CCGACAATCA GCACGCCTTT GCCCTGTTGC CTGCCTGGGA TGAAGAAAGC
ATTGCGGTAA AAGCCTTTAC TTACTTACCT GACAATCCAG TGAAAAACCC GGGTTGCGAG
AGTCTGTATT CGCAAATATT GCTCTTCGAT AGAAAAACAG GGGTACCGCA GGCTTTGATA
GACGGAACCA GCGTCACCTA CTGGCGCACC GCTGCGACTT CCGCGCTGGC AGCGAGCTTC
CTTGCCCGCA AGGACAGCAG CCGTTTGCTA ATGTGCGCCA CCGGCAATCT GGCTGTGTAC
ATGGCACTGG CACACGCCAG TGTGCGTCCA ATCAGAGAAA TCAGGATCTG GGGAAGGAAT
ACTCAAAAGA TTGATTCAAC CATCGCCACA ATCAGGGCGC AGCGCACCGA TATTGAGGTG
ACGGCAGCTA ATGCACTGCA ACTTGACGTT CCCTGGGCGG ACATCATCAG CTGCGCCACC
GGTTCCCCCA CCCCACTCTT TCCCGGAGAA TGGGTCACTC CCGGCACCCA CACTGACTTT
GTCGGCAATC ACCACAAAGA CTGCCGCGAG TGTGATTCTC ATCTGATAAC AAACTCTCAA
GTCTATGTAG ACGCGAGACT CAATGTGTTC AGTGAAGCCG GCGAGCTATT GATCCCTGTA
TCAGAGGGAC GCTTTTCGCT GGATGAGGTG AGAGCTGAGC TGTCAGAACT CTGTCAGGGC
ACAGCGCTGG GACGCGTAAA TGACAAGGAT ATTACGATGT TCAAGAGTGT GGGGTCTGCA
CTCGCCGATC TCGCTGGTGC GCGACTGCTT TTCAAGATGC TTCAGGAACA ATAA
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| Protein sequence | MKIIDGNQVQ QKLTFPPLVE ALRQQLCRPF TMPQRQVYAL SDTADNQHAF ALLPAWDEES
IAVKAFTYLP DNPVKNPGCE SLYSQILLFD RKTGVPQALI DGTSVTYWRT AATSALAASF
LARKDSSRLL MCATGNLAVY MALAHASVRP IREIRIWGRN TQKIDSTIAT IRAQRTDIEV
TAANALQLDV PWADIISCAT GSPTPLFPGE WVTPGTHTDF VGNHHKDCRE CDSHLITNSQ
VYVDARLNVF SEAGELLIPV SEGRFSLDEV RAELSELCQG TALGRVNDKD ITMFKSVGSA
LADLAGARLL FKMLQEQ
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