Gene Sama_2599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2599 
Symbol 
ID4606008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3105253 
End bp3106254 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID639782001 
Producthypothetical protein 
Protein accessionYP_928471 
Protein GI119775731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00476965 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTGTT TAAAGTTCGT CATACTATTT TTCTGCGCAT TTTTAATGGC TTGCGGAGAA 
AGCAATACTA TTGATGGCAA TCATTCGCCA ACTATCCCTG CAAGTGGGAA TCAAGCTGGC
ACCCTGAGTA TCGATATATC CGACTCGCCT ATGAGTGGGG TCGTCGGGGT CATAATTCAG
CTGAATGAAT TGGTGATGAC CGATGAACTC AATAACCAGC ATCGCTATTC ATTGAAAGAT
AGAAAATTTA ATCTTCTGGA CTATCAGGGA AAAAAGAGTA TCAGGATTGT TGATGGGTTG
AGTGTTCCGA CAGGTAATTA CCATGATGTT CATATGACAG TGATAGCAGG GGATGGTAAT
AACGGTTGCT ACGTTGAGGA TGGCCAGGGT ATCCATCCTA TGCAGGTACA GGAAGGGGTG
CTTCCTCTCA TGAATTTTTC TGTGTCAGCC AACCAACACC AGAGCTTTAC TATGGAGATT
GGACTCTATC TGGGGCTCAA TCATGATGAT GACCATAACT ACACATTGCG CCATCATGGC
AGCTGGTCGG TAGATAATCA TGTGATGGGG CATTTGCTGG GCGAGATGGA TCCTCAGTGG
ATAGCAGATT GTGAAACCGC CAATGCTGTA ATGCTTCCTG CCAGCGGTTC TTTTAGTCAC
TTAGCCTACC TATACCCTGA TTCAGTTAAC AGCCTCGCAC AAATGGGCGA TATGCATGAC
TCAACCCCTG AGGGACATGT TGCTCCCATT GCTGTCGCTC CTCTCAGGCA AGATACCTCT
GGCCATTGGT TCTTCGAGAT GGGGTATTTA CCGGAAGGGA TGTATCGTGT TGGCTATAGC
TGCCTCGGTA ATTTAGATAA CCCGCATGCA GATGATATCC AGCATGGTTC ATTTTCCATG
TTTGCTGACG CAGGTTTTGT GAGGATCAGC GCCGGTGTAA ATGGCGGGAC TGAAACTGTA
ATGCAGTGCG GTAATGGAAA TGGTGGTCAT CACGGAGGAT GA
 
Protein sequence
MRCLKFVILF FCAFLMACGE SNTIDGNHSP TIPASGNQAG TLSIDISDSP MSGVVGVIIQ 
LNELVMTDEL NNQHRYSLKD RKFNLLDYQG KKSIRIVDGL SVPTGNYHDV HMTVIAGDGN
NGCYVEDGQG IHPMQVQEGV LPLMNFSVSA NQHQSFTMEI GLYLGLNHDD DHNYTLRHHG
SWSVDNHVMG HLLGEMDPQW IADCETANAV MLPASGSFSH LAYLYPDSVN SLAQMGDMHD
STPEGHVAPI AVAPLRQDTS GHWFFEMGYL PEGMYRVGYS CLGNLDNPHA DDIQHGSFSM
FADAGFVRIS AGVNGGTETV MQCGNGNGGH HGG