| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2553 |
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| Symbol | |
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| ID | 4604800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3061520 |
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| End bp | 3062134 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781948 |
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| Product | putative lipoprotein |
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| Protein accession | YP_928425 |
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| Protein GI | 119775685 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3056] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.306742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACA AATCTGGTAT TCTGATGCGA CTTTTGTCTC GTTTTGGATC CAAGATGAAG
AAATCCTTAG CCGTATTGAC TGCCATTCTG ACCCTCAGCG GCTGCGCGGG CAGTCCGTCC
AATTACCTTG CTCTGAGTCC CGATGTACCC GCCATTACCA GCAGTGCCAA TGGACGTATC
GCCCTGAGCA CTCAGGATGC CAGAAGCTCC AACACCGCAG TGCGTATCAT CAAAGGGGAT
GACCCGGCCA AACTGATGGG GACTGGCGAG TCGCCAGCTA TTCAGTTGGG CAATCTGTTC
CGCCAGTCTT TCAGCAGTAA AGGCTTCCAA CTCGATCCGG CCGCCACCAA TATTCTTGAG
CTGAAACTGG AGCGTTTACA GTCGGATATC AATGAAACCA TGCTGGGTTA CGAGGCCGCC
AACGAAATCA TCATCAGCGC CTATGCCCGC AACGAGCAGC AACTGTTCAG CAAACGCTAC
ACCGCCAGAG GCACCATGAA GGGGCCGCTG AGCCTGGATT TGGCTACTCT GGAGCTGGAA
ATGAATAAGC TCATCACCCA GCTTGCTGGC GACATAGTCA ATGACCCCGA ACTGACCCAG
TTTCTGATGC AATAA
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| Protein sequence | MANKSGILMR LLSRFGSKMK KSLAVLTAIL TLSGCAGSPS NYLALSPDVP AITSSANGRI
ALSTQDARSS NTAVRIIKGD DPAKLMGTGE SPAIQLGNLF RQSFSSKGFQ LDPAATNILE
LKLERLQSDI NETMLGYEAA NEIIISAYAR NEQQLFSKRY TARGTMKGPL SLDLATLELE
MNKLITQLAG DIVNDPELTQ FLMQ
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