| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2541 |
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| Symbol | |
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| ID | 4604788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3051290 |
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| End bp | 3051799 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781936 |
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| Product | S-ribosylhomocysteinase |
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| Protein accession | YP_928413 |
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| Protein GI | 119775673 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1854] LuxS protein involved in autoinducer AI2 synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.396089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.562974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTAT TGGACAGTTT TACCGTTGAT CATACCCGCA TGAACGCCCC GGCCGTGCGC
GTAGCCAAGA CCATGAGCAC CCCAAAAGGT GACACCATTA CCGTGTTTGA CCTGCGTTTT
TGTGCCCCCA ATAAAGACAT TCTCAGTGAG CGTGGCATCC ACACTCTTGA GCACCTCTTC
GCTGGTTTTA TGCGTGATCA TCTCAATGGT GAAGGTGTCG AAATTATCGA TATCTCTCCC
ATGGGCTGCC GCACCGGCTT CTATATGAGC CTGATTGGCG AACCGGCTGA AAAGCGCGTG
GCGGACGCCT GGCTGGCTGC CATGGAAGAT GTACTGAATG TGGTTGATCA AAAGGCCATC
CCTGAGCTCA ACGAATATCA GTGCGGCACT TACGAGATGC ACTCACTGTC TCAGGCGCAG
GACATTGCCA AAGCCGTGAT TGCTGCCGGG ATCAGTGTGA ACCGCAACGA CGAACTTAAA
CTGTCAGACG AAATTTTGCA CAAACTCTAA
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| Protein sequence | MPLLDSFTVD HTRMNAPAVR VAKTMSTPKG DTITVFDLRF CAPNKDILSE RGIHTLEHLF
AGFMRDHLNG EGVEIIDISP MGCRTGFYMS LIGEPAEKRV ADAWLAAMED VLNVVDQKAI
PELNEYQCGT YEMHSLSQAQ DIAKAVIAAG ISVNRNDELK LSDEILHKL
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