| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2498 |
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| Symbol | |
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| ID | 4604745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2999634 |
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| End bp | 3000539 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781893 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_928370 |
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| Protein GI | 119775630 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TGAACTTTAC TCGCTTCAGA CACCTGATGA CCCTGATTTC CGTCGTTGCC
TTGCTGCTGT CGGTGCTGGC GATAAGCACC CGGGGCTTTA ACCTCGGGCT GGATTTTACC
GGCGGCGCCT TTGCTGAGGT TGCCATGGCA ACCGATACCC GGATTGATGA GGTCGAAACC
GCCCTGGCGC ATCTTGGTGA TGGCAGTATC TCAGTGGTTG CTACTGAGCC CGGGCGCTTT
TTGATTCGCA TGGGGGGCAC CCTGGATGCC CACACCCTTG CCGACTTCAA TCAATCTTTG
CTGCAGCTTG ACCCCACCAT GCAGGTGCTG GACAGGGACT CTGTCTCGCC GCAGGTAGGA
CAGGAGCTGT TTGAGCAGGG TGGCCTTGCG CTGCTCATCG CCATGCTGTG TATCCTTGGC
TATTTGTCGC TGCGCTTTGA GTGGCGCCTC GCGGCAGGTG CGCTTGTCGC ACTGGTGCAT
GATGTGGTGC TGGTGCTTGG GGTATTTGCC CTGACGGGGA TGGAATTCAA TCTTACGGTA
CTGGCCGCAG TCCTGGCAGT GCTGGGATAC TCCCTCAACG ATTCCATCAT CATTGCTGAC
CGGATACGCG AGCTTTTGCT GGCCAGGCCC AAGTCCAGGC TCACTGAGGT TAACGATGCG
GCCATAGTGC AAACCTTCTC CCGCACCATG GTGACATCGG GCACCACGCT TATCACAGTC
GGTGCTTTAT GGCTCCTTGG CGGCGCACCG CTGGAGGGCT TTGCGGTGGC CATGTTTGTT
GGGATAGTTA CTGGCACCTT CTCATCAGTA TCCGTGGGAA CTGTATTGCC TGAGCTTTTG
GGATTAAGTC CAGCACATTA CCGCAAAACG CCAGAAAGCG AGCTTTTGGC TGAAAAAGCC
AAGTAG
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| Protein sequence | MKTLNFTRFR HLMTLISVVA LLLSVLAIST RGFNLGLDFT GGAFAEVAMA TDTRIDEVET
ALAHLGDGSI SVVATEPGRF LIRMGGTLDA HTLADFNQSL LQLDPTMQVL DRDSVSPQVG
QELFEQGGLA LLIAMLCILG YLSLRFEWRL AAGALVALVH DVVLVLGVFA LTGMEFNLTV
LAAVLAVLGY SLNDSIIIAD RIRELLLARP KSRLTEVNDA AIVQTFSRTM VTSGTTLITV
GALWLLGGAP LEGFAVAMFV GIVTGTFSSV SVGTVLPELL GLSPAHYRKT PESELLAEKA
K
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