| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2454 |
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| Symbol | |
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| ID | 4604703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2959842 |
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| End bp | 2962073 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781851 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_928328 |
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| Protein GI | 119775588 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGG AAAAGCTCTT TTATCTGCAA GGTGTGGGAG ACAGGTTCAT CGACTGCGAT
GGCCGAGAAC AAGCCATACC CGAATCCGCT CGGTTGGCAA TGCTCAAATC CCTGATGGGC
CTCGAACAGT CCCCCGACGG GGCCGAAATA GCCGCCAGGG TGGACACCCT CGACAGCCTC
CCTTGGACTA AGTTGCTGCT GCCGCTGCAA TGGTGTTTTG AAACCCGTCC GTCAGTTGAA
TGCCAGCTGC CTGAAAACCT GAAGCAAGAC ATGGAATTAA CCCTGATTTC AGAGCAGGGG
GAGCGTGTAA CGCTGACGCT TTTGGCAAGG GATGCCGAGA CGACCGGTGA TTATCAAAGG
CCCGATGGCA GATACCTTCG CTGTCGCTAT TCCCTGCCAA CGCTGGCCAT GGGGGAGTTT
CAGCTGCAGC TGTCCCACCC TGTCCTCGGC CAGGGAAAGG GAGCCTTGCT GATTATCCCC
GAGCAGGCCT ACGGTGGCCC ACCGGGCCTT GGCAAGCGTC CCTGGGGCCT GGGGATAAGC
CTGTTTACCC TGAGAAGCCA GCGGCAGTGG GGCATCGGTG ACCTGGCCGA CCTGCAAACC
CTGATAGAAC TCTCCTCAGA AGTCGGGTGC GATTTTATCA CCCTGACGCC CTTGCATGCC
CCGGACATTG CCAACCCCGG ACTCGCAAGC CCCTACAGCC CCTGGGACAG GCGCTTTCTC
AATCCACTCT ATATCGCCAT CGACTTGGTG ACCGAATACA GCCAATTGGC GCAGGAGTTC
AATGGCGGCG ACTGGCGCCG GGAACGCCTT ATTCTCAACC AGGCAAGCCA GATTGATTAC
CCCAAACTTG CGCTGCTGAA GTATCGGGCG CTGGCAAAGT TGTTCGCTGC TTTTGGAAAG
CTGGATGAAT TCAGCGGGCG GCGAGTGCGC TTCGAACGTT TCGTGGCCGA GGGCGGCACG
GCGCTGAAGG ATTTTTGCCG TGATGTAAGC CAAAGGGCAT TAAGCCTGGA GGGGGAATGG
CATCGGGACC CAGCGCTGGC AGAAGCGCTG CAACGGGACG AGTTTCATGC CTGGCTGCAG
TTTGTGGCCG ATGAGCAGTT GTCGCTGTGT CAGCTTCGCT GCCGTCAGGT GGGCATGTCT
CTTGGTTTGG TGAGGGATTT GGCCGTGGGC GCCCTGGCTA TCGGCAGTGA AGTGAGCCGC
AGTGGCGTAT TTTGCCTTAA TGCCGATATC GGGGCGCCAC CGGACCCCTT CGCCCGTCAG
GGGCAAAACT GGGGCATGCC GCCGATGGAC CCTGTGGCGT TGAAAGACTC GGCCTTAAGC
CATCTTAAAT CCCTTTATCG AAGCAACATG CAAAGCTGTG GCGCGCTCAG AATCGACCAT
GTGATGGCCC TGACCCGGTT GTGGTGCTGG CCAGAAGGCG ATGACAACGG TTGTTACCTC
TACTATCCCC AGGAACTGAT GCTGGCGGTC TTGTGCCTTG AGAGCCACAA AAACCGCTGC
CTCCTGATTG GGGAGGATCT CGGCACAGTG CCGCCGCTGC TCAAGGGCTT GCTGCGGGAG
CGGGGCATTC TCGGGAACGA CGTATTTTAC TTTTGCCGGG ATGGCAGCGG ATTTTCCGCG
CCTCGGGAGC ACAGAGCCGG TGCCATGTTG CAGCTTGGCA ATCAGGATGT GCCGCCATTC
ATGGCCTGGT GGCGCGGCAT TGATCTCGGC TTACTCAATC AGCTTGGGCT TTTGCCGTCT
GTGGAAGAGG CGCACTTGAG CAGAGTCGCA CAGTGCCGGG GTTTGCTCGA AAGCCTGGTG
GAAGCCGGAT GGCTGCGCCG GGAGGCCCTG ACCTGGCAGC CCTGTGATGC ATTACTGCCA
GCGCCAGCGG GCAATATATC GGCAGGCACT ACATCGGCAG GTAACGCCAC CGACAGTATT
CGTCAGGGGA CGGCGGTTTT TGATGCCTTA CTCAACTGGC TGCCCGGCAG CCGCGCCAAA
TTGTTTTCTG TCAGCCTTTG GGATCTGGCC CTTGAATCCC AGCCCATCAA TATTCCCGGC
ACCAGTTTTG AGTACCCCAA TTGGCGTGCA CGCATGAGTC AGTCATTGGA GAGCCTTTGG
CAAAGCCGCG AGTTCAGAGC GCGACTGGAA GCGATTCGCG CCGGGCGCAG TCAGCCTCAA
GGTGGGCGCC CAGGCCCGTC TGTCATAGGC GAAGCCATGG CATCTGCCGA TGACAGAGAG
CGCCAAAACT GA
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| Protein sequence | MGLEKLFYLQ GVGDRFIDCD GREQAIPESA RLAMLKSLMG LEQSPDGAEI AARVDTLDSL
PWTKLLLPLQ WCFETRPSVE CQLPENLKQD MELTLISEQG ERVTLTLLAR DAETTGDYQR
PDGRYLRCRY SLPTLAMGEF QLQLSHPVLG QGKGALLIIP EQAYGGPPGL GKRPWGLGIS
LFTLRSQRQW GIGDLADLQT LIELSSEVGC DFITLTPLHA PDIANPGLAS PYSPWDRRFL
NPLYIAIDLV TEYSQLAQEF NGGDWRRERL ILNQASQIDY PKLALLKYRA LAKLFAAFGK
LDEFSGRRVR FERFVAEGGT ALKDFCRDVS QRALSLEGEW HRDPALAEAL QRDEFHAWLQ
FVADEQLSLC QLRCRQVGMS LGLVRDLAVG ALAIGSEVSR SGVFCLNADI GAPPDPFARQ
GQNWGMPPMD PVALKDSALS HLKSLYRSNM QSCGALRIDH VMALTRLWCW PEGDDNGCYL
YYPQELMLAV LCLESHKNRC LLIGEDLGTV PPLLKGLLRE RGILGNDVFY FCRDGSGFSA
PREHRAGAML QLGNQDVPPF MAWWRGIDLG LLNQLGLLPS VEEAHLSRVA QCRGLLESLV
EAGWLRREAL TWQPCDALLP APAGNISAGT TSAGNATDSI RQGTAVFDAL LNWLPGSRAK
LFSVSLWDLA LESQPINIPG TSFEYPNWRA RMSQSLESLW QSREFRARLE AIRAGRSQPQ
GGRPGPSVIG EAMASADDRE RQN
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