| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2439 |
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| Symbol | |
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| ID | 4604688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2933648 |
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| End bp | 2935291 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781836 |
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| Product | L-lactate permease, putative |
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| Protein accession | YP_928313 |
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| Protein GI | 119775573 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.947271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTCG TTCAACTTCT CGCCAGCTTG TCGCCTGTGA TCAGCGTTAT GCTGTTCCTG
GTGCTGCTCA GGCTCCCTGC ATCCAAGGCC ATGCCCATTT CGGCGGTGGT CACGGCGCTC
GCCGCCATTC TGGTCTGGCA AATGGATACC CAAATGCTGG CCGCTTCCGT GGTGGAGGGC
CTGCTGTCTG CCCTGACGCC ACTGTCCATC ATCTTCGGGG CAGTGTTCCT GCTGAACACC
CTCAAGTATT CCGGTGCCAT GGATACCATC CGCGCCGGTT TTACCAATAT CAGTGCTGAT
GCACGGGTGC AGGTCATCAT CATCTGCTGG CTGTTCGGCG CCTTTATTGA AGGTTCGGCT
GGCTTTGGTA CGCCGGCCGC CATTGGCGCG CCCTTGTTGG TACTGCTGGG CATTCCACCT
GTGGCCGCAG CGGTGGTGGC ACTCATTGCC GACTCCGCCA GTGTGTCTTT CGGTGCCATC
GGCTTGCCAG TGCTCTTTGG TATGGAGCAA GGCCTGATTG AAGGCGGTAC CAGCATGGCG
GCAGCTCAGA TAGCCGAACA TGGTGGCCAT TTCAGCGACT ATGCCCGCTA TATCGCCATG
CACATGATTA GCATCGACCT TATTACAGGA ACCCTGATCC CACTGGTCAT GGTCACTGTC
CTGACCGGTT TCTTCGGCCG TAAGAAGTCC TTTGCCGAAG GCCTCGCCAT CTGGAAATTT
GCCATCTTTG CCGGCCTTGC CTTTACTGTG CCTGCGTGGA TCATCAACTT TATCGCCGGT
CCCGAGTTTC CTTCGGTAAT CGGTGCCCTG CTTGGTATGG CGATGGTCAT CCCGGTTGCC
CGCAAAGGCT GGCTGCTGCC CAAAACCTCC TGGCACGATT TCGAAGAATC CACCGAGAAC
GGTAACGATG TACCCCATAC CGAGGTACGT TTCAGCCAGC TGGCTGCCTG GACACCTTAC
CTGGTGATGG CCGCTCTGCT GGTTGCCAGC CGCACCATAG CGCCCCTCAA AGCCTGGCTT
GGCGGCTTTA ACATCAGCTG GACTCACTTG TTGGGCACAG ATCTGAAGGC CAGCTTTGCT
ACCCTTTATG CACCGGGCGC CTTCTTTGTG CTGGTGTGTC TGCTGGGTTT TGTGCTGTTC
AAAATGCGCT CTGATGCCAT GCGCAACTCC GTGACTGTGT CACTCAAGTC CATGATCCCA
ACAGTGATTT CTCTTGGTGC CTCTGTGCCC ATGGTGAAAA TCTTCCTGAA CTCAGGCGCC
AATGAGGCGG GACTCGCCTC CATGCCTGTA GCGCTGGCCG ATATGCTCGC GGGCTCCATG
GGCGCCGTAT GGAACTGGAT GGCGCCAGTG GTCGGTATCT TCGGAGCCTT CCTGTCCGGC
AGCGCCACCT TCTCCAACAT GATGTTCTCT GGCCTGCAGT ACAGCGTGGC CGACAACATT
GGCGCCAACC ATGCGTTGAC CCTGGCGCTG CAAGGCATAG GCGCCAACGC CGGTAACATG
ATGTGCGTCA TGAACGTGGT CGCCGCCGCG ACCGTGGTGG GCATGGCTGG ACGTGAGTCA
GAAATTATCC GCAAGACCAT GCCGGTTGCG CTGGGGTATG CCCTACTTGC CGGAACCATA
GCAACCCTTT GGGGCGGATT CTAA
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| Protein sequence | MTFVQLLASL SPVISVMLFL VLLRLPASKA MPISAVVTAL AAILVWQMDT QMLAASVVEG
LLSALTPLSI IFGAVFLLNT LKYSGAMDTI RAGFTNISAD ARVQVIIICW LFGAFIEGSA
GFGTPAAIGA PLLVLLGIPP VAAAVVALIA DSASVSFGAI GLPVLFGMEQ GLIEGGTSMA
AAQIAEHGGH FSDYARYIAM HMISIDLITG TLIPLVMVTV LTGFFGRKKS FAEGLAIWKF
AIFAGLAFTV PAWIINFIAG PEFPSVIGAL LGMAMVIPVA RKGWLLPKTS WHDFEESTEN
GNDVPHTEVR FSQLAAWTPY LVMAALLVAS RTIAPLKAWL GGFNISWTHL LGTDLKASFA
TLYAPGAFFV LVCLLGFVLF KMRSDAMRNS VTVSLKSMIP TVISLGASVP MVKIFLNSGA
NEAGLASMPV ALADMLAGSM GAVWNWMAPV VGIFGAFLSG SATFSNMMFS GLQYSVADNI
GANHALTLAL QGIGANAGNM MCVMNVVAAA TVVGMAGRES EIIRKTMPVA LGYALLAGTI
ATLWGGF
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