| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2420 |
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| Symbol | xni |
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| ID | 4604669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2913084 |
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| End bp | 2913845 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781817 |
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| Product | exonuclease IX |
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| Protein accession | YP_928294 |
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| Protein GI | 119775554 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC TGCTCATCAT AGATGGATTA AATCTGGTCC GCCGTATCCA TGCCGCCCTG
CCCGATGAGG GCGACATGGA TACCCTGTAT GACAGGGTCG CCCAGGCATG CCGTAAATTA
CTGCGGGGTC ATCAGCCCAC TCACTGCGCC ATCGTCTGGG ATGGCGATGC CATCTCATGG
CGCAAACACC TGTACGAAGA CTATAAAAAA GGTCGCAAAC CCATGCCCGA AGCCCTCGCC
AAGGGGTTGC CGGCACTAAA AACCAAACTG GAAACATTGG ATGTACACTC GGTCAACGCC
GATTCTGAGG CAGACGATAT CATAGCTACC CTTGCCTGCA AGCTGGCGGC AACGGGCGGT
GAAGCCATTA TCGTGTCTAC TGACAAGGGA CTCTTGCAAC TGATGTCACC CCATATCAGG
CAATGGGATC ATTTCGCCGG CCAGTTTTTT GATATTGAAG CATTCGAGGC CAAGTTAGGT
ATCGAGCGGC ATCAGCTACT CGATTACATT GCCCTGTGCG GCGACAGCGG CAATAAAATT
CCCGGTATCC CCGGCATAGG CCCCAAGTCT GCCAGTGAAT TACTGCGCAC CTATCGCAGC
CTTGCCAATC TTTACCATTC CCTCGGTACC CTCGGCAGCA GGCAAGCCAA CAAGTTACGA
GAAGGCCGCG ATATGGCACG CCTCAGCTAC AAGTTGGCCA AACTGCAAAC CGAACTGCCG
CTGCACCTCA AGCTGAGCGA TCTCAGAGTC AATCCTTCCT GA
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| Protein sequence | MNRLLIIDGL NLVRRIHAAL PDEGDMDTLY DRVAQACRKL LRGHQPTHCA IVWDGDAISW
RKHLYEDYKK GRKPMPEALA KGLPALKTKL ETLDVHSVNA DSEADDIIAT LACKLAATGG
EAIIVSTDKG LLQLMSPHIR QWDHFAGQFF DIEAFEAKLG IERHQLLDYI ALCGDSGNKI
PGIPGIGPKS ASELLRTYRS LANLYHSLGT LGSRQANKLR EGRDMARLSY KLAKLQTELP
LHLKLSDLRV NPS
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