Gene Sama_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2407 
Symbol 
ID4604656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2894172 
End bp2895215 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content56% 
IMG OID639781804 
ProductOye family NADH-dependent flavin oxidoreductase 
Protein accessionYP_928281 
Protein GI119775541 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA TACTCTTTAC TCCAGTGGCG CTGAATGAGC GCATCGAGCT GAAAAACCGC 
ATCCTGATGG CGCCTCTGAC CCGTTGTATG GCAGACGATG CGCTGGTGCC TACCCAGGCT
ATGGTCGACT ACTATGCCCG CCGGGCAGAT GCAGGGCTGA TTATCAGTGA GGCCACCATT
ATTCGCCCCG ATGGTCAGGG TTATCCCAAC ACCCCGGGTA TTTTCACCCA GGCGCAAATT
GCCGGATGGC GTAAGGTCAC CGATGCCGTA CATGAAAATG GCGGCAAAAT TTTTGCCCAA
CTGTGGCACA CAGGCCGGGT GGCACATCCT CACTTTTGGG GTGGCACAGA AGTGATTGCG
CCGTCGGCGG TGGGGGTAGA GGGTACAGTG CCCAGAATGC GTGAGCTCAC CTATTTGGTT
CCCCGTGAAG CCACAGCGCT GGAAATTGCC CAGTTGGTGG AGGACTATGC CAAGGCGGCT
GAAAATGCCA TCGAAGCCGG GTTCGACGGC GTCGAAATCC ACGGTGCCAA CGGTTATATG
ATTGACGAAT TCCTGCATTA CGACAGCAAT CGCCGCGAAG ATGAGTTTGG TGGCAGCCCC
GAAAACATGG TGTGCTTCCC GCTGCAGGTT GTGGATGCCG TTACTTCACG CATCGGTGCT
GCGCGCACGG CACTGCGTAT TTCACCGGCG GCTTACTTCA ATATCGAGCC GGATCCCCGC
GACCGGGCGG TGTTTGATCT TTTGCTGTCT GAATTGGATA CCCGTGAACT TGCCTATTTG
CACGGCGGTA TATTCGACGA CAGCGTTCAT TATGACTACC TCGACGGCCG GGTCAGTGAG
TACCTGCGTC GCCACAGCCG TCATACCCTG GTGGGAGTGG GTAGCTACGA TGCCGAAACA
GCCGCTGCTG CCATTGCCAC CAATAAGTTC GACGTGATTG CGATTGGCAG ACCTTTTATT
GCCAATCACG ATTATGTTGC ACGGGTACGT GAAGGCGCAG AGCTCAAGCC CTACAGTGAT
GAGCTGCTGC CAGTGCTTTA CTGA
 
Protein sequence
MTDILFTPVA LNERIELKNR ILMAPLTRCM ADDALVPTQA MVDYYARRAD AGLIISEATI 
IRPDGQGYPN TPGIFTQAQI AGWRKVTDAV HENGGKIFAQ LWHTGRVAHP HFWGGTEVIA
PSAVGVEGTV PRMRELTYLV PREATALEIA QLVEDYAKAA ENAIEAGFDG VEIHGANGYM
IDEFLHYDSN RREDEFGGSP ENMVCFPLQV VDAVTSRIGA ARTALRISPA AYFNIEPDPR
DRAVFDLLLS ELDTRELAYL HGGIFDDSVH YDYLDGRVSE YLRRHSRHTL VGVGSYDAET
AAAAIATNKF DVIAIGRPFI ANHDYVARVR EGAELKPYSD ELLPVLY