| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2404 |
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| Symbol | |
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| ID | 4604653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2887909 |
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| End bp | 2889132 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781801 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | YP_928278 |
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| Protein GI | 119775538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.785328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTTG CTGCTTTTAC TCTGCCGTCT CCCTTGGCTA ACAATCTCGC TAAACTGGGC
TTTGTCGAGC CCACCGAGGT ACAGGCCGGT GCCATCCCCA TGATGTTGGC CGGGGATGAC
CTGATGGTGA AAGCGGCTAC CGGGACGGGT AAAACCGCCG CTTTTTTGCT GCCGATACTT
GCCCGGCTGC TTGCTGACGA GGTGGCAAGC CGCAACCTGC CTGCGCCCAG AGCCCTGGTA
CTGGTGCCCA CCAGGGAGCT GTGCCAACAG GTTTATGATG CCGCCAAAGC GCTGGCGAAA
GGCAGCGCCG TGCGTATTGC CCAGGTTTAT GGTGGTGTGC CCCTGGAAAG CCAGCTCAAT
GCCATCAAGG GCGGCGTGGA CTTGATGGTT GCAACGCCGG GGCGTTTGCT CGACCACCTG
AAAAAACGCA CCCTCAGAAT CGATACCGTC AGTCAGTTGG TGTTTGACGA GGCCGACCGT
ATGCTCGATA TGGGCTTTGA GGATGAGATC CGCGCGCTGG TGAAAAAGCT CGCCAAAACC
CGGCAAACTG CGCTGTTCTC AGCCACCTTG GGGGACAATG TCTGGCAGTT GGCCAAGAGC
CTGATGGATT CGCCCAAGCT GCTGGAAATC GCCGCGGCGA AAGATGCCAA GCCACTGATT
GAAGAGCAGG TTTATCAGCT CGACAGCGAG CGCAAGTTCG AATTTATCTG CCACTTGCTG
GGTAAAAACA GCTGGTCTCA GGTGCTTATT TTCAGCCGTA CCAAAGAAGG GGCCGATAAG
CTTACGGCCA AACTGGTAGA GGCTGGTCAC AGCGCCGTTG CCATGCACGC CGACCTGAGC
CAGCGTCAGC GGGAGCAAAA CCTTGCCGAC TTCAAGGCGG CCGATGCGCG GGTATTGGTG
GCAACTGACG TGGCCGCTCG GGGGTTGGAT ATACAGGCGC TGCCCTGCAT CATCAATGTC
GAACTGCCCT TTAAAAAAGA AGATTACGTA CATCGCATCG GGCGCACTGG CCGGGCTGGC
AGCGCCGGGC TTGCCATCAG TTTGCTGGAT GTTGCCGACG AGCCTTTGCT GGTGGCGCTT
GAGCACTACC TCGACCGGCG CTTGCCTCAG CAGTGGTATC CGGGCTTTGA ACCGGATTTG
TCCATCCGTC ATGAGCGTCC CCACAGCCTC AGTAAAGCGG CACAAAAACA AAAAGCCCGG
AAGCGGGCTT TGGCGAAGCG CTGA
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| Protein sequence | MSFAAFTLPS PLANNLAKLG FVEPTEVQAG AIPMMLAGDD LMVKAATGTG KTAAFLLPIL
ARLLADEVAS RNLPAPRALV LVPTRELCQQ VYDAAKALAK GSAVRIAQVY GGVPLESQLN
AIKGGVDLMV ATPGRLLDHL KKRTLRIDTV SQLVFDEADR MLDMGFEDEI RALVKKLAKT
RQTALFSATL GDNVWQLAKS LMDSPKLLEI AAAKDAKPLI EEQVYQLDSE RKFEFICHLL
GKNSWSQVLI FSRTKEGADK LTAKLVEAGH SAVAMHADLS QRQREQNLAD FKAADARVLV
ATDVAARGLD IQALPCIINV ELPFKKEDYV HRIGRTGRAG SAGLAISLLD VADEPLLVAL
EHYLDRRLPQ QWYPGFEPDL SIRHERPHSL SKAAQKQKAR KRALAKR
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