| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2403 |
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| Symbol | |
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| ID | 4604652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2886749 |
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| End bp | 2887804 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781800 |
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| Product | outer membrane porin, putative |
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| Protein accession | YP_928277 |
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| Protein GI | 119775537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.987816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTT TTCGCCTCTC CCTGTTAAGC GCTTCACTGT TGGCAGGAGT CAGCCTGCAC
GCGCAGGCCA CACCAGACTT TTATGGCCGG ATAGATTATT CGGTCACCCA TTCAGACACG
GGCGCCGCAA CCCACAAGGG GCTTGATGGT ACAGTGCTTG AGAACAACTT TACCCGTTTG
GGCGTTCGTG GAACTGAAGC CCTTACTGAG GGCCTGACCC TCTTCTATCA GGTTGAAATG
GGTGTCGACT CTGCCAGCGA ATCCGGCAAC AGCAAACCCT TTACCGCCCG CCCTACCTTT
ATCGGTATTC GTCATGCCAA TTGGGGCTCC CTGGCCGCGG GGCGCATGGA GCCGGTATTC
AAAATGACCA AGGGTTTTGT GGATGTGTTT GACAACTACA GCATGAAACA CGACCGCCTG
ATGGCCGGTG ACAAACGCTG GGGCGATTCT TTCGAATACA AGACCCCTGT GTGGCACGGC
TGGCAACTGG GCGCCAGCCT GCTGCTGGAG GATAACTATT ATCAGGACAG CGACAAGCGC
AAGGAGAATG GCAACTACCA ACTGGCGCTG ACCTATGGTG ATAAGAAGTT AAAAAACAGC
GACCTGTATT TTGCTGCGGC CTACTCAGAT GGTGTTGAAG ACATCAAGGC CTGGCGCGCT
GTGGGTCACT GGAAACTGGC ATCCCTTGGG CTTGAAAACC TGAAGCTTGG CACCCTGATT
CAACAATCAG AACTGGCCAA CCCGGCCAAA CCTTACTGGC AGGACAGAGA TGGCCTGGGT
TTTATTGTCA GTGGCTCTTA CAAGTGGGAT AAGTGGCTGT TTAAAGCCCA GTATGGCAAA
GACGAGTCCG GCACCGGCCT TATCGCCAAC CGCGTCTATT CGGCGCTGGG TGAGGCCGCG
ACTCAGGTTC CACATGTCAG CCAGTGGGGC GTTGGCGCGG AGTACTTTTT CTCCAAGTCG
ACCCGGGTAC ATCTGGAGGT GGGACAGTTC GACACCAAAC AATATGCTGA GTTTGATGAC
ACCATAACCA GCATAGGCAT TAGATACGAC TTTTAA
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| Protein sequence | MSVFRLSLLS ASLLAGVSLH AQATPDFYGR IDYSVTHSDT GAATHKGLDG TVLENNFTRL
GVRGTEALTE GLTLFYQVEM GVDSASESGN SKPFTARPTF IGIRHANWGS LAAGRMEPVF
KMTKGFVDVF DNYSMKHDRL MAGDKRWGDS FEYKTPVWHG WQLGASLLLE DNYYQDSDKR
KENGNYQLAL TYGDKKLKNS DLYFAAAYSD GVEDIKAWRA VGHWKLASLG LENLKLGTLI
QQSELANPAK PYWQDRDGLG FIVSGSYKWD KWLFKAQYGK DESGTGLIAN RVYSALGEAA
TQVPHVSQWG VGAEYFFSKS TRVHLEVGQF DTKQYAEFDD TITSIGIRYD F
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