| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2388 |
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| Symbol | smpB |
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| ID | 4604637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2867670 |
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| End bp | 2868152 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781785 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_928262 |
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| Protein GI | 119775522 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.255434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAAAGA AAAACTCCAA AAAGGCCGCC CAGCCGGCCA CGATCGCCCG CAATAAGCGC
GCGACCTTCG AATACAAATT CGATGAAAAA TTCGAGGCAG GCCTATCCCT GATGGGATGG
GAAGTGAAGT CTATCCGCGC CGGAAAAATC AACATCTCTG AAAGCTACGT GATGCTGAAA
AACGGTGAAG CCTTCCTGCA CCACTGCCAT ATCACCCCAC TGCACGCCGC CTCCACTCAC
GTGGTGTGTG ACCCTACCCG CCCACGCAAG CTGCTGCTTA ACCGCCGCGA GCTCGACCGC
TTGGCAGGTC TCGTTGAGCG CCAGGGCTAT GCCATCGTGC CTATCTCCAT GTACTGGCGC
AAAGGTGCCT GGGTTAAGGT CGAGATTGGT CTGGGTAAAG GTAAAAAAGC CCACGACAAA
CGCGATGACA TCAAGCAGCG TGACTGGGAC ATTGAAAAAG CCCGGGTGAT GAAGAACAAA
TAA
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| Protein sequence | MVKKNSKKAA QPATIARNKR ATFEYKFDEK FEAGLSLMGW EVKSIRAGKI NISESYVMLK
NGEAFLHHCH ITPLHAASTH VVCDPTRPRK LLLNRRELDR LAGLVERQGY AIVPISMYWR
KGAWVKVEIG LGKGKKAHDK RDDIKQRDWD IEKARVMKNK
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