| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2385 |
|---|
| Symbol | |
|---|
| ID | 4604634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2866119 |
|---|
| End bp | 2866610 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639781782 |
|---|
| Product | small protein A |
|---|
| Protein accession | YP_928259 |
|---|
| Protein GI | 119775519 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.750326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.621044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACA AGAAGCAAAG TCTTACCCTG CTGGGGGCCG CAGCCCTCTC ACTGTCTCTC
TCTGGCTGCA GTGTTTTCGA TTGGCTGGTG TACAAGCCTG ATATTCCTCA GGGTAACTAC
ATGGAGCCAC AGCAGGTTGA AAAGCTCAGA ATCGAGATGA CCAAGGAGCA GGCCGAATAT
GTGCTGGGCC GTCCTGTGCT CAGAGACAGC TTCGCTGACG ATACCTGGTA CTACGTGTAC
CATTTCAAAA GCGGTCGTGA CGCCAGTGTC ATTCACAAGG AATTAGTGCT GTATTTTGAA
AATAATCAAC TAGTTAAAGT AACAGGTGAT TATGAACTCT CCAGCGAGTT CAATACCCCA
CTGGAACAGA GTAAGCTGCC AAGTGTGAAT GCAGCCGAAG TCGTGCCTCA GGTGCCTGAA
CAACGCGGTG ATGACAAGCC GTTGGTGGAA GAAGGCAAGG AAAACGATCC CAAGGCCATT
CGCAAGTTCT GA
|
|---|
| Protein sequence | MLNKKQSLTL LGAAALSLSL SGCSVFDWLV YKPDIPQGNY MEPQQVEKLR IEMTKEQAEY
VLGRPVLRDS FADDTWYYVY HFKSGRDASV IHKELVLYFE NNQLVKVTGD YELSSEFNTP
LEQSKLPSVN AAEVVPQVPE QRGDDKPLVE EGKENDPKAI RKF
|
|---|
| |