| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2341 |
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| Symbol | |
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| ID | 4604591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2807634 |
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| End bp | 2808254 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781739 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_928216 |
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| Protein GI | 119775476 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.554096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCA TGCAATCTTC CAGCCCCAGT CGCAGTGAAC AAAAGCGCAG CGCCATTTTG
GAGGCGGCAA TCGCACTTTT TTGTGCCCAG GGTTTTCCCA ATACCAGTAT GGATGAGGTG
GCCAAAAAAG CCGGAGTGTC CAAGCAAACG GTGTATGCCC ACTTTGGTAA TAAGGACGAT
TTGTTTGTAG CCTCTATCGA GTGCAAATGC GACGTGCATG AAATAGCACC TGAGATGCTG
GCGGATGTGG CGCATCCCGA ACAGGTGCTG TTACAGTTTG CCAGTCGCTT TGGCGACATG
ATTGTCAGCG AAGAAGCCTT GACGGTTTAC CGGGCTTGCG TGTCACAGTC TGAGACGCAT
CCGGAAGTCT CCCGTTTGTA TTTTGCGGGC GGGCCAAGCC GGATCCTCAC TATGCTCAGC
GACTACTTTT CCAGGGTGGA AGCGACAGGT GCATTTCGGT TCGGTGATGT GCGCCATGCG
GCAATCCGTT TATGCCTGAT GCTTTACGGA GAAAGGCGTC TGATGTTGGA GTTGGGATTA
CCACTCCAGG AAACAGAAGG TGAACGGGCC CGCTATCTTG CAGACACAGT GAAAATGTTT
TTGGCTGCCG CAAAAAGCTG A
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| Protein sequence | MTSMQSSSPS RSEQKRSAIL EAAIALFCAQ GFPNTSMDEV AKKAGVSKQT VYAHFGNKDD
LFVASIECKC DVHEIAPEML ADVAHPEQVL LQFASRFGDM IVSEEALTVY RACVSQSETH
PEVSRLYFAG GPSRILTMLS DYFSRVEATG AFRFGDVRHA AIRLCLMLYG ERRLMLELGL
PLQETEGERA RYLADTVKMF LAAAKS
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