Gene Sama_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2339 
Symbol 
ID4604589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2805933 
End bp2806484 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content52% 
IMG OID639781737 
Producthypothetical protein 
Protein accessionYP_928214 
Protein GI119775474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.844973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAC TCCTTTCCCT GCTGTTACTC TGCCTTTCTT TTCAGGGTGT TGCCAAAGAG 
GTTGCGGGTA TAGCCCTGCC CGATAGCCTG TTGCAGGATA ATCACGCCTA TGTGCTCAAT
GGCGCCGGGG TACGCAGTAA ATTTTTTATG GACCTATACG TCGGCAGCCT CTATCTAACC
ACCACAGCCG ACACAGCCGA TAAGGTGATG GCACAGGATA AAGCCATCAT CCGGCTGGAT
ATTCTGTCTG ACCTTATCAC CAGCGAGAAA ATGCGTAACG CAATTAACGA AGGCTTTGAA
GCCGCAACCG ATGGCAAACA GGATGACGCC ATGAAGGCCA GCATCGCCAC CTTTATGACG
CTGTTTGAAG CCGATATCAA ACCAGGCGAC AACTTCGTGC TGATTGCTGG CCGGGATGGC
GTGGAAGCCA TCAAAAATGA TGTCCCCCTA CCTAAAGTAG GTGATGCAAC CTTTGCTGCG
GCCCTTCTGA AAATCTGGCT CGGCGAGCAT CCGGCCCAGA AAAGCCTTAA GCAGGAAATG
CTCGGACGTT GA
 
Protein sequence
MKSLLSLLLL CLSFQGVAKE VAGIALPDSL LQDNHAYVLN GAGVRSKFFM DLYVGSLYLT 
TTADTADKVM AQDKAIIRLD ILSDLITSEK MRNAINEGFE AATDGKQDDA MKASIATFMT
LFEADIKPGD NFVLIAGRDG VEAIKNDVPL PKVGDATFAA ALLKIWLGEH PAQKSLKQEM
LGR