Gene Sama_2326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2326 
Symbol 
ID4604576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2789281 
End bp2790456 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content55% 
IMG OID639781723 
Producthypothetical protein 
Protein accessionYP_928201 
Protein GI119775461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.217224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGA TAAAATCCGC CCTTGTATTC AGTGCGCTCC TTGTGAGCAT TCAGGCACAA 
GCCGACTGGG TGACGGCTCA GGGCGAGGCT GTGATTGTGA ATGGCAACAT CACCAAAGCA
CGTGCAGAAG CGATAGAACA GGCCGTCAGC TATGCAAGCC TGCAAGCAGG TGTCAGCATT
GAATCCAGTC AACATATGGT CGATGGCCAT CTCATTGATA CCAGCACCCA GCTGATGCAA
CAACTGATGA CCGGGCCCGT ACAACTCATC AGTGAGCAGA TTGAAAACAA CCGCTTACGG
GTACAATTGC GGGTCGAGCT GATGGAAGCG CCTCAAAGTC AGTGCCAGAG TACACATCTG
AAAGCCGCAA TCTTATTGCC GGAAGCGGCA GTGAGTCACC GCAGCCAATT GGCACAGGGG
CAGATAAACA GTCTGGGAGC AGCCGTATCC CAGCAGCTCG CCCGCAGACT GGACAGTACC
TCAGGCGCGG CCTTCGCCAA CTTGCGACCG GGCGCACGGC TTGATTTGGA CGCAAGACAA
CTTGCCGCCC CCGGCTATCG TTTGCCGGGT TACCTTGCCA TGGCAAGCGA CAGCCAATAC
GTGTTGGTCC CGCAGATCAC CGATGTCTCT ACCGAACCTG CACAGAGCAG CTATTTTGGT
CTGATAACAG ACGCTCCCGA GCGCCAATTT GCCCTTACCC TCACCCTGTT CCAGGGGATC
AGTGGCGAAA TTATCTGGCG TGACGAGTTC AACACCTCTG CTCCCTGGGA GTTTGAGCGT
ACTGAGCAGG TCTCTCCTGC CCATGACAGA TTCTGGCGCT CCGCCTACGG CATGGCGGTG
GATAAACTGC TGGTACAGGC GATAAAAGAA CTCGACAAGG CACTGCTGTG CCGACCTGTA
CTGGGGCAAA TTGTTGCCAG GCAGGGGCAA ACCCTGATCC TGAATTTGGG CCGCCGTCAT
GGCATCAAGG TGGGGGATGA ACTCGCAGTC GTGCTCGCCA AACACATTCC AGACAGGCTA
AACGAGACCC GCGCCACCGG GAACAACACT AAAACAACCA TCAGCATAAC CCAGATCACC
GAAGACAGTG CCCGCGCCGA ACTCTCTGGT CTTGGCAGCG TCGACAACAT CCAGGTAAGC
GATATTGCGA TAAAAACCGG GCAGAACAAG AATTAA
 
Protein sequence
MGLIKSALVF SALLVSIQAQ ADWVTAQGEA VIVNGNITKA RAEAIEQAVS YASLQAGVSI 
ESSQHMVDGH LIDTSTQLMQ QLMTGPVQLI SEQIENNRLR VQLRVELMEA PQSQCQSTHL
KAAILLPEAA VSHRSQLAQG QINSLGAAVS QQLARRLDST SGAAFANLRP GARLDLDARQ
LAAPGYRLPG YLAMASDSQY VLVPQITDVS TEPAQSSYFG LITDAPERQF ALTLTLFQGI
SGEIIWRDEF NTSAPWEFER TEQVSPAHDR FWRSAYGMAV DKLLVQAIKE LDKALLCRPV
LGQIVARQGQ TLILNLGRRH GIKVGDELAV VLAKHIPDRL NETRATGNNT KTTISITQIT
EDSARAELSG LGSVDNIQVS DIAIKTGQNK N