Gene Sama_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2298 
Symbol 
ID4604548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2763740 
End bp2764075 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content56% 
IMG OID639781695 
Productflagellar hook-basal body complex protein (FliE) 
Protein accessionYP_928173 
Protein GI119775433 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAG GTCCATCTTC ATTCATGCAG GAAATGCAGA AACTCCAGGG CGAACTCAGT 
CCATCTATGG GTATCGAGCC TCAGCCGCTT CGCCAGGTCG GCAACACCAG CGGCGCTGAT
TTCGCCAGTC TGCTCGCCAA CGCAGTAGGA CACGTAAACG AACTGCAGCA AAGCTCCTCC
AGCCTGGCCA CCCGACTGGA CATGGGCGAT ACCCGCGTGA CCCTGTCCGA TACAGTAATC
GCCCGCGAAA AGGCCAGTGT TGCCTTTGAG GCCACTGTGC AGGTGCGCAA CAAGCTTGTC
GAAGCCTACA AAGAAATCAT GAGCATGCCC GTTTAA
 
Protein sequence
MQIGPSSFMQ EMQKLQGELS PSMGIEPQPL RQVGNTSGAD FASLLANAVG HVNELQQSSS 
SLATRLDMGD TRVTLSDTVI AREKASVAFE ATVQVRNKLV EAYKEIMSMP V