| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2273 |
|---|
| Symbol | |
|---|
| ID | 4604523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2738908 |
|---|
| End bp | 2739987 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639781670 |
|---|
| Product | CheW domain-containing protein |
|---|
| Protein accession | YP_928148 |
|---|
| Protein GI | 119775408 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.607284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.126231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGT CAGTTGACGA AACCGTTGTC GATTTTTTCC GATTGCTGCT GACTGAAGAC
GCTCAGGTAT CGGATGACAC TTCGCTGACC AAAGTCCACA CCCAAAATGC TCCGGTTGGC
GATATATCCG TTGTTGTATC AACTGGCGTT GGTAACGCCT TTACCGATGC CAATGCGCCC
ACGCAAGAGA CCTTGACCGG CTCTGCAGCT GGCGAGATGG CATCAGCCCC TTCGAAATCC
CAACCCGTAA AAACTGAGCT CCAGATAGCA AAATCTGAGT CAGCACAATC ACCAAGGATC
GCTCCGAGTC GGGACCCGCT GGATAAGGCC TCGTTGGAGA AGTTGCTGGC GCCGGTGTTT
GACGTTGCAA AACCACTTGA GCACCCCGCA GTTGAGCAGC CTGTAGTTGA ACAAAAGGCT
GCTTCAGTTG AATCGCCACC AGTGGTTGCA GAGACTGTCA CCAAACCAAA GATTGCGGTT
AGGACTAAGG TTCAGGAAAA CGTAAAAGCT CAGGTGACGC TTGAGACTGA ACAAGATGTC
ACCCCGGTAG CGCCCGTGCA AACTGCGCCA CAGACACAAA CGGGAGCAAC GCCACCCAGC
ATTACAAAAG ACCTGCGTGA AGAGCTGGAT GACGAGTTTC AGGTACTATT CTTTAAAGTA
GCCGGATTAA CCCTGGCTGT GCCCTTGGTC AGTTTGGGTG GGATAGTCAA GGTTGAGCGC
ATCAATCATA TTTTCGGTCG TCCGGATTGG TTTTTGGGCG TGCAGACCCA CAGAGAGTCG
CAACTCAATC TGGTGGACAC CTGCGCGTGG GTAATGCCGG AAAAATACAA TGAAGAACTG
GCGCAAAACG TAAATTATCA ATATCTTGTA TTATTGGAAG ACAGTAATTG GGGCTTGGCC
TGCGAATCTT TGGTCAACTC GGTACGGATT AAGCAGTCCC AAGTCAATTG GCGCACCACA
GCGGGTAAAC GCCCTTGGTT GGCTGGTGTA GTGAAAGAAC AAATGTGTGG CATCTTGAAT
GTCAGGGCAT TGATCCAAAT GCTCAATGCA GGTTTAGGTT GTCAGGATCC TATTAGCTGA
|
|---|
| Protein sequence | MSKSVDETVV DFFRLLLTED AQVSDDTSLT KVHTQNAPVG DISVVVSTGV GNAFTDANAP
TQETLTGSAA GEMASAPSKS QPVKTELQIA KSESAQSPRI APSRDPLDKA SLEKLLAPVF
DVAKPLEHPA VEQPVVEQKA ASVESPPVVA ETVTKPKIAV RTKVQENVKA QVTLETEQDV
TPVAPVQTAP QTQTGATPPS ITKDLREELD DEFQVLFFKV AGLTLAVPLV SLGGIVKVER
INHIFGRPDW FLGVQTHRES QLNLVDTCAW VMPEKYNEEL AQNVNYQYLV LLEDSNWGLA
CESLVNSVRI KQSQVNWRTT AGKRPWLAGV VKEQMCGILN VRALIQMLNA GLGCQDPIS
|
|---|
| |