| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2262 |
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| Symbol | |
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| ID | 4604512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2725839 |
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| End bp | 2726822 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639781659 |
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| Product | chain length determinant protein |
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| Protein accession | YP_928137 |
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| Protein GI | 119775397 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0523506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000488654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACTACAC AAATCACTCA AAACCCACAT ACTTCTAAAT CAAACGTCGA TGCCCAATTC
CCGCAAATGG CGCGGGAAGA AGAAATCGAT TTAAGAGAAC TTTTTGCTGT CATCAGGCAA
GGCAAATGGC TAATCTTCGC CATTACCGCC GTATTTGCCA TTGGCTCGGT GATTTTTGCC
ATCATGCAGC CAAATATCTA CAAAGCTGAA GCATTATTGG CACCAGCTGA AGCAGATGGC
AGTAGCGGTG GTCTTGCTGC ACTGGCATCC CAGTTTGGCG GCCTCGCCAG TATGGCGGGC
ATTAATTTGG GCGGTGGCGG CGGAACAGAT AAAACCCAAC TTGCCATTGA AGTGTTAAAA
TCGCGCCAAT TTGTGGGTGA ATTTATTGAA AAACACCAAA TACTGCCTGA GCTGATGGCG
GTGAAGAAAT GGCACATGGC AGAAAACAAC CTAAGCTTCG ATCCAGAGCT TTATAACAGC
GACACCAAAA CGTGGATCCG CGAGGTTAAA CCTCCATTTA AGCCCGAACC GTCAGTGCTC
GAAGCACACA AAGAGTTTTT AAAAATCCTG GCTGTTAGCA AAGACAAAGA AAGCGGGATG
GTTAAGCTTT CGGTGGAGCA CCAATCGCCT CTTGTTGCCA AACAGTGGGT AGACTGGCTG
GTAGCTGACA TTAACCGCGT GATGAAAGAG CGTGATGTGT TAGAGGCCAT GCGAAGCATA
GAGTTTTTGA ATAAACAAAT AGAACAAACA AACGTAGCCG ATATCCGCGC TATTTTATAC
AAACTGGTGG AAGAGCAGGC TAAAACCATC ATGTTTGCTG AAGTGCGTGA TGAATATGTT
TTTAAAACCC TGGACCCGGC ATTGGTACCT GAAGAAAAGG CTAAGCCAAA ACGAGCTTTG
ATTTGTGCAC TGGGAACAGT GCTGGGCGGT ATGTTTGGAA TGATGTTGGT GATGGTAAGG
AGTTTTTCTA GAAAAGAAAG TTAG
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| Protein sequence | MTTQITQNPH TSKSNVDAQF PQMAREEEID LRELFAVIRQ GKWLIFAITA VFAIGSVIFA
IMQPNIYKAE ALLAPAEADG SSGGLAALAS QFGGLASMAG INLGGGGGTD KTQLAIEVLK
SRQFVGEFIE KHQILPELMA VKKWHMAENN LSFDPELYNS DTKTWIREVK PPFKPEPSVL
EAHKEFLKIL AVSKDKESGM VKLSVEHQSP LVAKQWVDWL VADINRVMKE RDVLEAMRSI
EFLNKQIEQT NVADIRAILY KLVEEQAKTI MFAEVRDEYV FKTLDPALVP EEKAKPKRAL
ICALGTVLGG MFGMMLVMVR SFSRKES
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