Gene Sama_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2179 
Symbol 
ID4604429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2636457 
End bp2636834 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content54% 
IMG OID639781564 
Producthypothetical protein 
Protein accessionYP_928054 
Protein GI119775314 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000382039 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0298403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG TGATTGGCTT GGGCGGTGTC TTCTTCAAGA GTGCAGATCC CGAAGCACTG 
GCAAACTGGT ACAAGACTCA CTTGGGTATG CCGGTGGAGC ATTGGGGAGG CTGTGCCTTC
AGGGCACTGG ACTTGCCTAA AGGCAGTTAC AGTGTCTGGA GTCCGTTTGC GGCTGGCAGC
GACTATTTTC ACCCCTCCCG CCATCCCTTT ATGTTTAATT TGGTTGTGGA CGACCTAGAG
GCAGTGCTGG CCCAGGCTGC AGCTGGTGGG GCCGAGGTGC TGCCCGGTCG GGAGGACACT
GAATTTGGTC GTTTTGGTTG GTTTATCGAT CCCGATGGCA ATAAGGTGGA ACTCTGGCAA
ATGAGTGTCA ATTCGTAA
 
Protein sequence
MAKVIGLGGV FFKSADPEAL ANWYKTHLGM PVEHWGGCAF RALDLPKGSY SVWSPFAAGS 
DYFHPSRHPF MFNLVVDDLE AVLAQAAAGG AEVLPGREDT EFGRFGWFID PDGNKVELWQ
MSVNS