| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2087 |
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| Symbol | |
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| ID | 4604337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2530984 |
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| End bp | 2531967 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781472 |
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| Product | hypothetical protein |
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| Protein accession | YP_927962 |
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| Protein GI | 119775222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000733877 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGCGA AGAAATCCAA TTCAAGTTTG ACCTTGCCTG TGGCCATTTC CCTGGCCATA
CACCTGGGTA TTATTCTGGT GTTGGCGCTG GGCGCGCTGG ACTTTTTTAC CAAAAAGCTC
GAGACCCCGG AACCCGCAGC TGCCGCGCCT GTGCAGGCTG TACTGATAGA CCAGCAAAAG
GTGGCGGCAG CGGCTGAGAA AATTAAACAA GAGAAGCGTG ACGCCGAGCG CCGCGAACAG
CTGCGTCAGG AAGAGCTCGA ACGCAAGGCC GACGAAGCCC GTAAGGCCCG TGAGCAGGAG
CAGGCCAAGT TGAAACAGCT CGAAATCGAG CGTAAGCAAA AAGAAATCGA GACCCAAAAG
GCCATCGATG AAGCGAAGCG CAAGGAAGAG CAGGCCAAAC AAGCTGCTGA CAAGGCTGAA
AAAGAGCGAG TGCGTAAAGA GTCTGAGCGC AAGGCAGCAG AAGAAGCGGC CAAGAAGGCA
GAGGATAAGC GTAAGGCTGA AGAGGCTGCC GCCAAGAAAG CCGAGGAAGA GCGTAAACGC
AAGGCCGAGG AAGAGCGTAA GCGCAAAGCT GAGGAAGAGG CTAAGCGTAA GGCGGAAGCA
GAACGTAAGC GCAAGGCCGC AGAAGAAGCT GCGCGCCGTG AGCAGGAGTT GGCCGATATG
ATGGCCGCTG AGCAGGCCAC CATTAATGCG GCGCGCAATC GTCAACTTGT ATCTGAGCGC
GACAGATATA CCGCCATGAT CAAGGCTACC ATTCAGCGCA ACCTGGTGGT GGATGAGTCG
ATGCGCGGCA AAAGCTGCAA AATGTTTATC CGTCTCGCCA GCGATGGTTT TGTGACCACC
GCCGAAGCGC GGGAAGGGGA CGGCGTGGTG TGCCGCGCCG CCAAAGCGGC CATTACCAAG
GCCGGACGTC TGCCGGTATC ACCTGAGCCT GAGGTGTACC AGCTGATGAA AGAAATCAAT
TTGACCGTGC AACCGGAAAT CTAA
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| Protein sequence | MSAKKSNSSL TLPVAISLAI HLGIILVLAL GALDFFTKKL ETPEPAAAAP VQAVLIDQQK
VAAAAEKIKQ EKRDAERREQ LRQEELERKA DEARKAREQE QAKLKQLEIE RKQKEIETQK
AIDEAKRKEE QAKQAADKAE KERVRKESER KAAEEAAKKA EDKRKAEEAA AKKAEEERKR
KAEEERKRKA EEEAKRKAEA ERKRKAAEEA ARREQELADM MAAEQATINA ARNRQLVSER
DRYTAMIKAT IQRNLVVDES MRGKSCKMFI RLASDGFVTT AEAREGDGVV CRAAKAAITK
AGRLPVSPEP EVYQLMKEIN LTVQPEI
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