Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2010 |
Symbol | |
ID | 4604260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2441656 |
End bp | 2443008 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781387 |
Product | putative chaperone |
Protein accession | YP_927885 |
Protein GI | 119775145 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTGCAG GATTTGACTA TGGCAGTGCC AACTGCGCCA TGGCGGTATG TGAAGGGGAC TCAGTACGTC TGCTGCCCAT CGGAGATTCA GGTGGCCAAT ATCTGATGTC GGTGGTGTAT GCGCTGGATG TCAGTTTCAT CACCGAGGCG GTGTGTCAGC GTTTACCCGA TAATCAAGCC AGGGCGCTGG TGCAAAAACG TGGGGCTGAA CTTGCCCGCG CCCGACGCAT GCGTCAGGAA CTGGATTTAA CCGCAACTGA TGACACTGTG TTCATCGGAG AGGCGGCACT GAAAGCCTAT CTGGATACCC CCGAAGAAGG CTTTTTTGTG CGTTCACCCA AATCCTTTTT GGGCGCAACC GGCCTGCGCC CTGAGCAGGT GGCTCTGTTT GAAGACATAG TTACCCTGAT GATGCTTGAA GTGAAAGGCC GCGCCGATGC GTTGCTGCAA AACCCTGTGA CTCACGCCGT TATCGGTCGG CCGGTTAACT TTCAGGGTAT TGGCGGTGAA GAGGCCAATA TTCAGGCCCA GAGTATTCTG CAAATTGCCG CCATGAGAGC GGGTTTCACT CAAGTGTCAT TCCTGTTCGA ACCCCTCGCG GCTGCCTTTG ATTTTGAATC GTCCCTCGAG GCAGACAAGC GGGTATTGGT GGTGGACGTA GGCGGCGGTA CCACAGATTG CTCTTTGGTG ACCATGGGAC CCAATAAACG CAGCCAAACC GAGCGCAGCG AAGACTGCCT TGGCCACAGT GGCCAGCGTA TTGGCGGAAA CGATTTGGAT ATTGCGCTTG CCATGGAGTG CCTGATGCCC CATTACGGCC TTGGCGATAT GCTGAGTACG GGTAAACCCA TGCCAAGACA AATGTTCTGG CAGGCGGTGG CCATTAACGA TGTGGGGGCG CAGCGCGACT TTTTCTCCCT GAGTTATGCC ACGGCCATTA AAGAACTCAG AAAAGACGCC ATTAACCCCG ATGCCCTCGA CCGATTGGCC AGGCTTAGAC GAGACCAGCA ACACTGCCAG TTGGTGAAAC TGGCTGAACT TGCCAAAATT GACCTGAGCG GTGAAGAGCT CACTCAGGTT GAACACCCCG ATGGAGCACA CACCAGTGTT GCTGCTGATG CGTTCGGTCT TGCGATTGCG CCCCTGGTGC AGCGTATCGG TGAACTGATG AGAGCCGCGG TGGGGGACGA GTCTTCCCCG GATCTGATTT ATGTCACCGG TGGCAGTAGT CGTTGCCCGC AGGTGGCAAG CAGCATCGCA GCCGTGTATC CCGGGGTTGA GGTGGTGCAG GGCGACAGCT TTGGCTCAGT CACCGCCGGG CTTGCCCGCC GGGCGGCATT GGAATTTGCC TGA
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Protein sequence | MFAGFDYGSA NCAMAVCEGD SVRLLPIGDS GGQYLMSVVY ALDVSFITEA VCQRLPDNQA RALVQKRGAE LARARRMRQE LDLTATDDTV FIGEAALKAY LDTPEEGFFV RSPKSFLGAT GLRPEQVALF EDIVTLMMLE VKGRADALLQ NPVTHAVIGR PVNFQGIGGE EANIQAQSIL QIAAMRAGFT QVSFLFEPLA AAFDFESSLE ADKRVLVVDV GGGTTDCSLV TMGPNKRSQT ERSEDCLGHS GQRIGGNDLD IALAMECLMP HYGLGDMLST GKPMPRQMFW QAVAINDVGA QRDFFSLSYA TAIKELRKDA INPDALDRLA RLRRDQQHCQ LVKLAELAKI DLSGEELTQV EHPDGAHTSV AADAFGLAIA PLVQRIGELM RAAVGDESSP DLIYVTGGSS RCPQVASSIA AVYPGVEVVQ GDSFGSVTAG LARRAALEFA
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