Gene Sama_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2010 
Symbol 
ID4604260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2441656 
End bp2443008 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content56% 
IMG OID639781387 
Productputative chaperone 
Protein accessionYP_927885 
Protein GI119775145 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGCAG GATTTGACTA TGGCAGTGCC AACTGCGCCA TGGCGGTATG TGAAGGGGAC 
TCAGTACGTC TGCTGCCCAT CGGAGATTCA GGTGGCCAAT ATCTGATGTC GGTGGTGTAT
GCGCTGGATG TCAGTTTCAT CACCGAGGCG GTGTGTCAGC GTTTACCCGA TAATCAAGCC
AGGGCGCTGG TGCAAAAACG TGGGGCTGAA CTTGCCCGCG CCCGACGCAT GCGTCAGGAA
CTGGATTTAA CCGCAACTGA TGACACTGTG TTCATCGGAG AGGCGGCACT GAAAGCCTAT
CTGGATACCC CCGAAGAAGG CTTTTTTGTG CGTTCACCCA AATCCTTTTT GGGCGCAACC
GGCCTGCGCC CTGAGCAGGT GGCTCTGTTT GAAGACATAG TTACCCTGAT GATGCTTGAA
GTGAAAGGCC GCGCCGATGC GTTGCTGCAA AACCCTGTGA CTCACGCCGT TATCGGTCGG
CCGGTTAACT TTCAGGGTAT TGGCGGTGAA GAGGCCAATA TTCAGGCCCA GAGTATTCTG
CAAATTGCCG CCATGAGAGC GGGTTTCACT CAAGTGTCAT TCCTGTTCGA ACCCCTCGCG
GCTGCCTTTG ATTTTGAATC GTCCCTCGAG GCAGACAAGC GGGTATTGGT GGTGGACGTA
GGCGGCGGTA CCACAGATTG CTCTTTGGTG ACCATGGGAC CCAATAAACG CAGCCAAACC
GAGCGCAGCG AAGACTGCCT TGGCCACAGT GGCCAGCGTA TTGGCGGAAA CGATTTGGAT
ATTGCGCTTG CCATGGAGTG CCTGATGCCC CATTACGGCC TTGGCGATAT GCTGAGTACG
GGTAAACCCA TGCCAAGACA AATGTTCTGG CAGGCGGTGG CCATTAACGA TGTGGGGGCG
CAGCGCGACT TTTTCTCCCT GAGTTATGCC ACGGCCATTA AAGAACTCAG AAAAGACGCC
ATTAACCCCG ATGCCCTCGA CCGATTGGCC AGGCTTAGAC GAGACCAGCA ACACTGCCAG
TTGGTGAAAC TGGCTGAACT TGCCAAAATT GACCTGAGCG GTGAAGAGCT CACTCAGGTT
GAACACCCCG ATGGAGCACA CACCAGTGTT GCTGCTGATG CGTTCGGTCT TGCGATTGCG
CCCCTGGTGC AGCGTATCGG TGAACTGATG AGAGCCGCGG TGGGGGACGA GTCTTCCCCG
GATCTGATTT ATGTCACCGG TGGCAGTAGT CGTTGCCCGC AGGTGGCAAG CAGCATCGCA
GCCGTGTATC CCGGGGTTGA GGTGGTGCAG GGCGACAGCT TTGGCTCAGT CACCGCCGGG
CTTGCCCGCC GGGCGGCATT GGAATTTGCC TGA
 
Protein sequence
MFAGFDYGSA NCAMAVCEGD SVRLLPIGDS GGQYLMSVVY ALDVSFITEA VCQRLPDNQA 
RALVQKRGAE LARARRMRQE LDLTATDDTV FIGEAALKAY LDTPEEGFFV RSPKSFLGAT
GLRPEQVALF EDIVTLMMLE VKGRADALLQ NPVTHAVIGR PVNFQGIGGE EANIQAQSIL
QIAAMRAGFT QVSFLFEPLA AAFDFESSLE ADKRVLVVDV GGGTTDCSLV TMGPNKRSQT
ERSEDCLGHS GQRIGGNDLD IALAMECLMP HYGLGDMLST GKPMPRQMFW QAVAINDVGA
QRDFFSLSYA TAIKELRKDA INPDALDRLA RLRRDQQHCQ LVKLAELAKI DLSGEELTQV
EHPDGAHTSV AADAFGLAIA PLVQRIGELM RAAVGDESSP DLIYVTGGSS RCPQVASSIA
AVYPGVEVVQ GDSFGSVTAG LARRAALEFA