Gene Sama_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1957 
Symbol 
ID4604207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2387582 
End bp2387950 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content52% 
IMG OID639781334 
Producthypothetical protein 
Protein accessionYP_927832 
Protein GI119775092 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0991042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.534316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGAC TCAAACCAGG ATTTGACCAC GATACCATTG CTTTAGAAGC ATCAGGGATG 
ATTGAGGCCG ATGACTACAG CCGAGTATTG ATCCCCGCCC TCGAACAAGC GCTCAAAGAT
CATGCATCGG TGCGTATCTG GTACGAAATT GCTGATGGAT GCCGGGGTGT CAGCCTGCTG
TCGCTATGGC AGGACGTGCT GCTTGGGCTC TTTCATCTCG ATGACTTCAG GCGTATCGCC
ATTCTCACCA ATCGTCCCGC TTTTCGCCGC ATGGGCGAAC TCATTGGCTT ATTCATGCCA
TGCCCCGTCT GCGTGTTCTC CTTGGATGAG GTGCAAATCG CCAAAATCTG GTTGTGTCAA
AGTCGCTGA
 
Protein sequence
MIRLKPGFDH DTIALEASGM IEADDYSRVL IPALEQALKD HASVRIWYEI ADGCRGVSLL 
SLWQDVLLGL FHLDDFRRIA ILTNRPAFRR MGELIGLFMP CPVCVFSLDE VQIAKIWLCQ
SR