| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1955 |
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| Symbol | |
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| ID | 4604205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2384062 |
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| End bp | 2386611 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781332 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_927830 |
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| Protein GI | 119775090 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.941314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTT CCAAGGCCTA TGTATCACAT ACATTGCACC CGAGGTGGCG TAATAGCCTG
CCCTTTCGGG TGGGACTGCT GCAAAGCCTG ATAGCCACCC TGCTTCTTCT GGCCACCTTG
TGGATCCTCC TTGGCAGCCA AAAAGAAGAG CGGCTGGCAC AGGAAATGAA CCTCAATCTC
TCGCAGGGGC AGCTAGTCCA AGCCAGATTA CGGGATTTAA CGGCCCAGCT CGATACCTTG
GTGGTTGCCA TTGCGGACGT CGCTGGGACC CAACGAAACG ATATCGCCAC CATTGAAAAC
ACCATACCCA GCCTGCTCTC ATTACCTAAC CATAAAGATG TGGTCGCCAG TGGCGGAATT
TGGCCGGAAA AGGGGCATCC TCTCGGTCAG GAAAATGAGA GCAGAAGCCT TTTTTGGGTC
AGAGACTTGC TCGGGCAGCT GCGTAAAAAC GACGGTTACA ACCAAAGCAG CGACCATTAT
TTTGATGAAC TCTGGTATAA GCCCATGCGG CTATTTCCGG CTGGCAGGGT ATTTTGGTCC
CCTTCCTACA TAGACCCCCA TACTCAGGAA TCCATGGTCA CTGCATCGGT GCCCATCTGG
CAAGAGCATG AATTCCAGGG CGTCGCGACC ATAGATGTAA GCCTTTCCAG CCTCTCAAGT
TACCTTACCG AGTCCCGCAA AGAACTCGGG GGCTATGTGA TCCTGTTGGA CCAATTTAAT
CAGGTGTTGT CGGCTCCCCT GCCCGGCGCA GAGCAAAGTT TACCCGAACA CGCAAGCTTG
CCCGATTTAG CCACACTCAC CCAACGGTAT CCTCAACTGT CAGCGTTGCT CTCTCTGGTA
GAGGACGCTG ACACGCTATT TATCAAGGAC GCGCAAACAC ACCAGGTCAT CACTCAGGAA
CAGTTTCTGA CCATGACCCC CAGCAATTTC CCTCTGGGAA AACAGATGTA CCAGGCCATA
ATCAACACCA GCGCCCTGGC CATGCCGCAA TCGCCTGTAT TATTGGCAAC CCTGGCCATC
GACGCAGACC CGCTGATTGC CGCGCCTTCA CTGGTTTCCG TCTATCGGAT GCCGGGCACA
TTTTGGAAGG TGATCACGGT AACCCCGAAA AGCTCTTTCA AAAATGAAGC CTTGCTTCTG
GTTGAGCGCG CAGGACTTTA TCTGCTGCTG GCGCAGGTGC TGGCACTGCT GCTGATGATT
TTTGTACAAC ACAAACTCTA TATCAAACCG ATTGCCCGCA TGGTGTCGGC GTTAAAGGCG
GAAGATGCAG CCCATCTGGA GCTGCAAGCG AGTCAGCGTG AGGATGAAAT TGGGGTGTTG
GCAAGTGCCC TAGTTGCCCG AACCCATCAG CTGGAAATCG CTATGGCCAG TCTCGATGCC
TCAAATTTGG CGTTGGAACA GCAGCTGGAG GTTCAGCAAG AGGCGCAGCA GGATTTGCTC
GCCCACAAAG AGCGACTGAC CGCCTTGCTC AAATCATCCC CCAACCTCAT TTTTATCAAG
GATATCGCTG GCCGCTACCT GATGGTGAAC GATAAGTTTT GCGAAACCAT AGGCCTTGAC
CGACACAGGA TCCTGGGTGC CACCGACCGA CAACTCTTTT CGTCGGATCT TGCCCAGGCC
TATGGCGAGA GCGATCAGCG AGTAATGACC CAGGATGCCC CGCTGCAATT TGAAGAGACA
CTGCCAACAC GTTTGGGAGA GATACGTTTC CAAATGACCA AGTTCGCCAT TCGCGATGAC
GACGACAATC TAAGGGGAAC CGGTGCCATC GCCTTTGATA TTCAAAATCG CAAGCGCATT
GAAAAAGAAT TGCTGGAGAG GATAACGACA CTCGAGCACA GCCTTAGTCT GTGCTCAAGT
GAAAACGGCA AACTGCAGCA AAAGCTGCAG CTTGCCGAAT TTGAGCTGTC GCAAAAAACA
CAAAACATAG AAGAGACCAA AGCAAAGGGC GAGGCGTGGG GTACAGAGAG AAGATTATTT
AAAAGTTGGC TTAGGGATTT GGTGAGTCTA ATTGCCCGTG AGCAGGAAAA TCTTCTGGCA
AAAGCCTGCA ACCCGGGTGC AACCCCCATG GAAAAGCTAA AGGATGCGCT GAGCGAACAC
GCAGAGCGGC TGCGGGTACT GGAGCTGTTA ACCGGGAGAC ATAAGGCAAG CCAACGCGCC
GTTCCCATGG ATGTGTTACA GCAGTTGACC CACCTGTTTC AATCAGAACT CGCCGGACGT
GATATCCAAA TTCGGCTGGA GGGCGAACGT AATGTCAGTG TCCAACTTGA GACCTGGCAG
TTAACACTGC TGATATTCAG CTTGTTAAAA CTCCTTTGCA CTCAGACTGA TAACGCTCCT
CAGGGCAATA TAGTCACTGT GTGTGTCGAC GGATCCGGAC CTGATTGTCT CATCAGGTTT
GATAGCCAGG GCGCGAGCTC TGACATTATC GCGCCCGAAC TCAGCGCCCT AACCGCCTGG
CTTGAAAGAC AATTTGGCGG GTCGCTGACG CTCTGTCACT CACTGACTGT GGCTACCATA
GTGGATTGCA GATTACCCTT TGCAGATTAG
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| Protein sequence | MNRSKAYVSH TLHPRWRNSL PFRVGLLQSL IATLLLLATL WILLGSQKEE RLAQEMNLNL
SQGQLVQARL RDLTAQLDTL VVAIADVAGT QRNDIATIEN TIPSLLSLPN HKDVVASGGI
WPEKGHPLGQ ENESRSLFWV RDLLGQLRKN DGYNQSSDHY FDELWYKPMR LFPAGRVFWS
PSYIDPHTQE SMVTASVPIW QEHEFQGVAT IDVSLSSLSS YLTESRKELG GYVILLDQFN
QVLSAPLPGA EQSLPEHASL PDLATLTQRY PQLSALLSLV EDADTLFIKD AQTHQVITQE
QFLTMTPSNF PLGKQMYQAI INTSALAMPQ SPVLLATLAI DADPLIAAPS LVSVYRMPGT
FWKVITVTPK SSFKNEALLL VERAGLYLLL AQVLALLLMI FVQHKLYIKP IARMVSALKA
EDAAHLELQA SQREDEIGVL ASALVARTHQ LEIAMASLDA SNLALEQQLE VQQEAQQDLL
AHKERLTALL KSSPNLIFIK DIAGRYLMVN DKFCETIGLD RHRILGATDR QLFSSDLAQA
YGESDQRVMT QDAPLQFEET LPTRLGEIRF QMTKFAIRDD DDNLRGTGAI AFDIQNRKRI
EKELLERITT LEHSLSLCSS ENGKLQQKLQ LAEFELSQKT QNIEETKAKG EAWGTERRLF
KSWLRDLVSL IAREQENLLA KACNPGATPM EKLKDALSEH AERLRVLELL TGRHKASQRA
VPMDVLQQLT HLFQSELAGR DIQIRLEGER NVSVQLETWQ LTLLIFSLLK LLCTQTDNAP
QGNIVTVCVD GSGPDCLIRF DSQGASSDII APELSALTAW LERQFGGSLT LCHSLTVATI
VDCRLPFAD
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