Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1885 |
Symbol | |
ID | 4604135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2300052 |
End bp | 2301539 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781262 |
Product | Slt family transglycosylase |
Protein accession | YP_927760 |
Protein GI | 119775020 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000159239 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAACA TTAATTACTT TTTTGCCGGC AGCTTACTGC TGCTTTCCGG CTGTCAGTTG ATCCCTAATG GGGACATCCC AGCTGATGAT GAGACCAATA TCAATCCGAC GTTAGAAGTT GTCTCCCCCA CCGAATCTGA CACCCGGGAG CAGGTCGTTG AAGCACGGGA TCTGTGGCAA CGTATGCAGG AAGGTATGCA CTGGGAAAAG CCCAACGAAG CCTACGTCGC ACCTTTCCGT CAGAAGTTGC TGGCCAATCC AAGGCACCTT GAGCAAGTGT TCAGCCGTGC CGAGCCATTC CTGTATCTGA TAGTCGATGA ACTCGAACGA CGGGGATTGC CCCTGGAACT GGCGCTGTTA CCCGCCATCG AAAGTGCTTT TGATGCAGAC GCTATTTCCC ATGCCAGTGC ATCCGGCTTA TGGCAGTTAA CGCCGCCCAT GGCCCGTTAT TTCGGACTGA AGATGAACTG GTGGTATGAC GGCCGCAACG ACGTGGTAGC GTCCACCCGA GCAGCGGCGG ATTTCCTGGA ATACCTGTAC GATCGCACCG GCAACAACTG GCACTATGCA ATTGCAGCCT ATAACAGCGG CGAAGGCCGG GTATTGAGTG CCGTACGTCA TAATGAAAAA GCGGGCAAGC CGACTGATAT CTGGGCGTTA AAGCTACCTC GGGAAACCCG AAATTATGTG CCAAATCTAT TGGCGCTGGC CGATGTTGTC AAACACGCAG ATAAATACGG CGTCTCCTTA CCTCGCATCA AAAACGAACC TGTAGTCGAT GTCGTAGAGA TAGGCAGCCA GATAGAACTT GCATTGGCAG CAGAGCTCGC GGGGTTGAGT GTCAGTGAAC TTAAGTCACT GAATCCCGGA TTCAAACAGT GGGCAACCGC CCCCAAAGGT CCTCACCGCT TGGTGGTACC TGTCAGCAAC GCGCCTGATT TTGTCGTGGC ACTGGCGCAA ACCCCGCAAG AGCAGCGGGT ACAGTGGGCC AGATACCAGA TTAAGCGTGG TGACAGTCTT AGCGTCATTG CCCGCCAATT CGGCACCACA CCTCAGGTGC TCAAGCAGGT GAATCAGATG AAGAACAATC AGCTGATTGC CGGCAAAGAA TTGGTAGTGC CAGCCAATGG CCGCACAAAT GCAAGTGCGC AGCTGGCATC GGCAACGCCA AAACAAAGCT ACAAAGTAAA ATCCGGTGAT AGTCTGTGGA AAATCGCCCA GGCCCACGGT ATCAGTGTGA ATGACCTGAA AAAATGGAAT TCCCTGGGTA GCAAAGCAAT CATCCGTCAG GGGCAGCTCC TGACAGTTTG GCCAGGCTCT AAAGCCGTCG CCAACACGCG CTCGACCACC TATCAAGTCA AACGCGGCGA CTCTCTGTCG CTGATTGCGC AGAAATTTAA GGTCAAGATC TCTGAGCTGA TGAGCTGGAA CAAACTCTCC AGCAGTGCCC TGCAGCCCGG ACAGACCCTG ACCGTCATGC TGCAGTAA
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Protein sequence | MRNINYFFAG SLLLLSGCQL IPNGDIPADD ETNINPTLEV VSPTESDTRE QVVEARDLWQ RMQEGMHWEK PNEAYVAPFR QKLLANPRHL EQVFSRAEPF LYLIVDELER RGLPLELALL PAIESAFDAD AISHASASGL WQLTPPMARY FGLKMNWWYD GRNDVVASTR AAADFLEYLY DRTGNNWHYA IAAYNSGEGR VLSAVRHNEK AGKPTDIWAL KLPRETRNYV PNLLALADVV KHADKYGVSL PRIKNEPVVD VVEIGSQIEL ALAAELAGLS VSELKSLNPG FKQWATAPKG PHRLVVPVSN APDFVVALAQ TPQEQRVQWA RYQIKRGDSL SVIARQFGTT PQVLKQVNQM KNNQLIAGKE LVVPANGRTN ASAQLASATP KQSYKVKSGD SLWKIAQAHG ISVNDLKKWN SLGSKAIIRQ GQLLTVWPGS KAVANTRSTT YQVKRGDSLS LIAQKFKVKI SELMSWNKLS SSALQPGQTL TVMLQ
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