| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1868 |
|---|
| Symbol | |
|---|
| ID | 4604118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2276852 |
|---|
| End bp | 2277583 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639781244 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_927743 |
|---|
| Protein GI | 119775003 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.242561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGT TTCTGTTATC CCTTGCCCTG CCACTGTTGA GTATTAATGC GTATGCACAA
AACTCACTGT CGCCCTTTGA GGCCGACTAC AAGGTGCTGT ACGGCGATAT TGGCCTGGGC
AAGGCCCATT TCAGCCTGCC GGCACCCGAG GGCAACTATT ACGAATACAA TTTTACCAGC
GAGCTGAGTT TGCTGTTTTT AAGCGATGAG CGCAGTATCA AGAGTAAATT CCGCCGCACC
GACCACGGCC TCGAGCCCAT GGTGTTTATC CATCAGCGCA CGGGTACCGG CAGTGATTTC
AGCGAGCAGG TGGCCTTTTT GAAAGACAAG TCCATCGTGC GCAGCAACTA CAAGGGTGAG
CATGTTGAAC TGCCGTTTGA GAACAAGCTC TACGACACCA TGATGGTGCA GTTGCAGTTC
CGTCAGGATC TGATTGAAGG CAAAGACAGC CTCGAATACC ACATGGTGAA AGACAACGAG
ATTGATGATT ACTCCTTCAA ACGCATGGGT GAAGAAGTGC TGAATATCGA TGGCACCGAG
TACCGTACCC TGCGCCTTGA AGTCATTCGC GACAGCAAAA AACGTAAAAC CGTGGTGTGG
ATGGCCCCGG ATTTGGCCTA CCTGCCGGTA CGCATGACTC ACTTTGAAAA AGGCGACAAG
CAGCTGGATG TACAGCTGAC CGGTTATCGT TTTTCCGACA CCCAGGCCGC ACCGCTGGCA
GCCAACCCTT AA
|
|---|
| Protein sequence | MRKFLLSLAL PLLSINAYAQ NSLSPFEADY KVLYGDIGLG KAHFSLPAPE GNYYEYNFTS
ELSLLFLSDE RSIKSKFRRT DHGLEPMVFI HQRTGTGSDF SEQVAFLKDK SIVRSNYKGE
HVELPFENKL YDTMMVQLQF RQDLIEGKDS LEYHMVKDNE IDDYSFKRMG EEVLNIDGTE
YRTLRLEVIR DSKKRKTVVW MAPDLAYLPV RMTHFEKGDK QLDVQLTGYR FSDTQAAPLA
ANP
|
|---|
| |