| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1857 |
|---|
| Symbol | |
|---|
| ID | 4604107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2261234 |
|---|
| End bp | 2261437 |
|---|
| Gene Length | 204 bp |
|---|
| Protein Length | 67 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639781233 |
|---|
| Product | thiamine biosynthesis protein ThiS |
|---|
| Protein accession | YP_927732 |
|---|
| Protein GI | 119774992 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2104] Sulfur transfer protein involved in thiamine biosynthesis |
|---|
| TIGRFAM ID | [TIGR01683] thiamine biosynthesis protein ThiS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTA TCAGTGTTAA CGGACATTCC CATCCAATAG ACGACGGCCA GGATCTGGCC
AGTTTGGTTA AACATCACTG CGAGCGCGAT AGCCATATCG CGCTGGTGCT CAACGGTGAA
GTAGTACCGC GGCATAGCTG GGAACATATT CATCTTAAAC ACAATGATGC GGTTGAACTT
TTTGCAGCAG TGGCAGGAGG CTGA
|
|---|
| Protein sequence | MLSISVNGHS HPIDDGQDLA SLVKHHCERD SHIALVLNGE VVPRHSWEHI HLKHNDAVEL
FAAVAGG
|
|---|
| |